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Updated: Mar 25, 2026

Spatial Separation of Molecular Conformers and Clusters
Published on: January 9, 2014
Visualizing the orientational dependence of an intermolecular potential
Adam Sweetman1, Mohammad A Rashid1, Samuel P Jarvis1
1School of Physics and Astronomy, University of Nottingham, Nottingham NG7 2RD, UK.
Abstract:
Scanning probe microscopy can now be used to map the properties of single molecules with intramolecular precision by functionalization of the apex of the scanning probe tip with a single atom or molecule. Here we report on the mapping of the three-dimensional potential between fullerene (C60) molecules in different relative orientations, with sub-Angstrom resolution, using dynamic force microscopy (DFM). We introduce a visualization method which is capable of directly imaging the variation in equilibrium binding energy of different molecular orientations. We model the interaction using both a simple approach based around analytical Lennard-Jones potentials, and with dispersion-force-corrected density functional theory (DFT), and show that the positional variation in the binding energy between the molecules is dominated by the onset of repulsive interactions. Our modelling suggests that variations in the dispersion interaction are masked by repulsive interactions even at displacements significantly larger than the equilibrium intermolecular separation.
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