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Published on: May 27, 2021
Mining association patterns of drug-interactions using post marketing FDA's spontaneous reporting data
Heba Ibrahim1, Amr Saad2, Amany Abdo1
1BioMedical Informatics Specialty, Department of Information Systems, Faculty of Computers and Information, Helwan University, Egypt.
This study introduces a hybrid Apriori algorithm to detect drug interactions (DI) and adverse drug events (ADEs) from spontaneous reporting systems (SRS). The novel method efficiently identifies potential safety signals, including rare adverse drug reactions (ADRs).
Area of Science:
- Pharmacovigilance and Drug Safety
- Data Mining and Machine Learning
- Clinical Pharmacology
Background:
- Pharmacovigilance (PhV) is crucial for public health and clinical research, aiming to detect novel adverse drug events (ADEs).
- Drug interactions (DI) contribute significantly to unexpected ADEs, necessitating early detection.
- Spontaneous reporting systems (SRS) are primary data sources for post-marketing PhV.
Purpose of the Study:
- To identify drug interaction (DI) signals within spontaneous reporting systems (SRS).
- To present an optimized, tailored data mining algorithm named "hybrid Apriori" for DI signal detection.
- To assess the algorithm's ability to extract significant drug interaction-adverse event (DIAE) patterns.
Main Methods:
- Applied a modified association rule mining (ARM) approach using the hybrid Apriori algorithm to the U.S. FDA's FAERS database.
- Extracted drug interaction-adverse event (DIAE) patterns and assessed them using a three-element taxonomy and performance metrics.
- Employed logistic regression (LR) to quantify interaction magnitude and direction, controlling for co-medication effects.
Main Results:
- The hybrid Apriori algorithm identified 2933 interacting DIAE patterns, including 1256 serious cases.
- The method demonstrated high performance with an average precision of 85%, negative predictive value of 80%, sensitivity of 81%, and specificity of 84%.
- Results confirmed the algorithm's capability to detect serious interacting DIAEs and provided statistical context against spurious findings via LR modeling.
Conclusions:
- The developed hybrid Apriori method effectively detects drug interaction-adverse event (DIAE) signals from SRS data.
- The algorithm shows proficiency in identifying rare adverse drug reactions (ADRs).
- This approach enhances the timely detection of potential drug safety issues from real-world data.
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