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OntoCR: A CEN/ISO-13606 clinical repository based on ontologies
Raimundo Lozano-Rubí1, Adolfo Muñoz Carrero2, Pablo Serrano Balazote3
1Medical Informatics, Hospital Clínic, Unit of Medical Informatics, University of Barcelona, Barcelona, Spain; Department of Computer Science, Autonomous University of Barcelona, Barcelona, Spain.
This study designed a semantically interoperable clinical repository using ontologies, achieving data storage independent of content specification. The approach enables flexible data reuse and storage with relational technology, demonstrating successful clinical data exchange.
Area of Science:
- Health Informatics
- Computer Science
- Medical Informatics
Background:
- Clinical data management faces challenges in semantic interoperability.
- Existing systems often lack flexibility and extensibility.
- Standardization is crucial for effective healthcare data exchange.
Purpose of the Study:
- To design a novel, semantically interoperable clinical repository.
- To ensure conformity with the CEN/ISO 13606 standard.
- To leverage ontologies for flexible clinical data management.
Main Methods:
- Extended the OntoCRF framework for ontology-based clinical repositories.
- Integrated an OWL model incorporating CEN/ISO 13606, ISO 21090, and SNOMED CT.
- Developed a meta-model and a test application for evaluation.
Main Results:
- Demonstrated a complete evaluation cycle for the developed system.
- Created a meta-model in OWL format.
- Successfully communicated standardized extracts to another organization, proving semantic interoperability.
Conclusions:
- A native CEN/ISO 13606 compliant clinical data repository is feasible.
- Ontology-based approach ensures data storage independence from content specification.
- Relational technology can be utilized for storage while maintaining extensibility.
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