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Mass Spectrometry-Guided Genome Mining as a Tool to Uncover Novel Natural Products
Published on: March 12, 2020
Variochelins, Lipopeptide Siderophores from Variovorax boronicumulans Discovered by Genome Mining
Colette Kurth1, Sebastian Schieferdecker1, Kalliopi Athanasopoulou1
1Leibniz Institute for Natural Product Research and Infection Biology e.V., Hans-Knöll-Institute , Beutenbergstraße 11a, 07745 Jena, Germany.
Abstract:
Photoreactive siderophores have a major impact on the growth of planktonic organisms. To date, these molecules have mainly been reported from marine bacteria, although evidence is now accumulating that some terrestrial bacteria also harbor the biosynthetic potential for their production. In this paper, we describe the genomics-driven discovery and characterization of variochelins, lipopeptide siderophores from the bacterium Variovorax boronicumulans, which thrives in soil and freshwater habitats. Variochelins are different from most other lipopeptide siderophores in that their biosynthesis involves a polyketide synthase. We demonstrate that the ferric iron complex of variochelin A possesses photoreactive properties and present the MS-derived structures of two degradation products that emerge upon light exposure.
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