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Updated: Mar 23, 2026

Employing Digital Droplet PCR to Detect BRAF V600E Mutations in Formalin-fixed Paraffin-embedded Reference Standard Cell Lines
Published on: October 8, 2015
BRAFV600E Mutations in High-Grade Colorectal Neuroendocrine Tumors May Predict Responsiveness to BRAF-MEK Combination
Samuel J Klempner1, Bruce Gershenhorn2, Phu Tran3
1Division of Hematology-Oncology, Department of Medicine, Chao Family Comprehensive Cancer Center, University of California, Irvine, School of Medicine, Orange, California. sklempner@theangelesclinic.org.
Unlabelled:
Neuroendocrine tumors comprise a heterogeneous group of malignancies with a broad spectrum of clinical behavior. Poorly differentiated tumors follow an aggressive course with limited treatment options, and new approaches are needed. Oncogenic BRAF V600E (BRAF(V600E)) substitutions are observed primarily in melanoma, colon cancer, and non-small cell lung cancer, but have been identified in multiple tumor types. Here, we describe the first reported recurrent BRAF(V600E) mutations in advanced high-grade colorectal neuroendocrine tumors and identify a BRAF alteration frequency of 9% in 108 cases. Among these BRAF alterations, 80% were BRAF(V600E) Dramatic response to BRAF-MEK combination therapy occurred in two cases of metastatic high-grade rectal neuroendocrine carcinoma refractory to standard therapy. Urinary BRAF(V600E) circulating tumor DNA monitoring paralleled disease response. Our series represents the largest study of genomic profiling in colorectal neuroendocrine tumors and provides strong evidence that BRAF(V600E) is an oncogenic driver responsive to BRAF-MEK combination therapy in this molecular subset.
Significance:
BRAF(V600E) is an established oncogenic driver, but significant disparities in response exist among tumor types. Two patients with treatment-refractory high-grade colorectal neuroendocrine tumors harboring BRAF(V600E) exhibited rapid and durable response to combined BRAF-MEK inhibition, providing the first clinical evidence of efficacy in this aggressive tumor type. Cancer Discov; 6(6); 594-600. ©2016 AACR.This article is highlighted in the In This Issue feature, p. 561.
Insights
Advanced high-grade colorectal neuroendocrine tumors with BRAF V600E mutations show dramatic response to BRAF-MEK therapy. This targeted treatment offers new hope for patients with this aggressive cancer.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Neuroendocrine tumors (NETs) are a diverse group of cancers with varying clinical behaviors.
- Poorly differentiated NETs are aggressive, have limited treatment options, and require novel therapeutic strategies.
- BRAF V600E mutations are oncogenic drivers found in various cancers, including melanoma and colorectal cancer.
Observation:
- This study identified recurrent BRAF V600E mutations in 9% of advanced high-grade colorectal neuroendocrine tumors.
- BRAF V600E mutations constituted 80% of all identified BRAF alterations in the cohort.
- Two patients with metastatic high-grade rectal neuroendocrine carcinoma, refractory to standard treatments, showed a dramatic response to BRAF-MEK combination therapy.
Findings:
- The study represents the largest genomic profiling of colorectal neuroendocrine tumors to date.
- BRAF V600E is confirmed as an oncogenic driver in a specific subset of colorectal neuroendocrine tumors.
- Urinary BRAF V600E circulating tumor DNA monitoring effectively paralleled treatment response in patients.
Implications:
- BRAF-MEK combination therapy demonstrates significant clinical efficacy in BRAF V600E-mutated high-grade colorectal neuroendocrine tumors.
- Targeted therapy offers a promising new approach for patients with treatment-refractory advanced colorectal neuroendocrine tumors.
- Genomic profiling and targeted therapies are crucial for advancing treatment strategies in rare and aggressive cancers.
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