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Updated: Mar 22, 2026

MicroRNA Amplification and Recognition through Locked-nucleic-acid In situ Hybridization as a Novel Detection and Quantification Method
Published on: October 7, 2025
Orderly nucleic acid aggregates by electrostatic self-assembly in single cells for miRNA detection and visualizing
Yuanyuan Wang1, Zhaopeng Yu2, Zhen Zhang2
1Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong, Shandong Normal University, Jinan 250014, China.
Researchers developed orderly nucleic acid aggregates (ONAAs) on nanoparticles for in-cell miRNA detection. This non-destructive method uses electrostatic DNA self-assembly and hybridization chain reaction for sensitive imaging in living cells.
Area of Science:
- Biotechnology
- Nanotechnology
- Molecular Biology
Background:
- Mesoporous silica nanoparticles (MSNs) are versatile platforms for biomolecule conjugation.
- Developing non-destructive methods for intracellular analysis is crucial for understanding cellular processes.
- MicroRNA (miRNA) detection is vital for disease diagnosis and biological research.
Purpose of the Study:
- To develop a novel method for in situ detection and imaging of miRNAs within living cells.
- To create orderly nucleic acid aggregates (ONAAs) self-assembled on functionalized nanoparticles.
- To utilize electrostatic DNA self-assembly and hybridization chain reaction (HCR) for signal amplification.
Main Methods:
- Synthesis of mesoporous silica nanoparticles (MSNs) functionalized with positively charged aminopropyl groups (PC).
- Self-assembly of orderly nucleic acid aggregates (ONAAs) on the surface of PCMSNs.
- Implementation of a hybridization chain reaction (HCR) on the PCMSN surface for signal amplification.
- In situ detection and fluorescence imaging of miRNAs in living cells.
Main Results:
- Successfully developed ONAAs self-assembled on PCMSNs.
- Demonstrated a novel electrostatic DNA self-assembly for HCR on PCMSNs within single cells.
- Established a non-destructive amplification strategy for miRNA detection and in situ imaging.
- Achieved prominent and aggregated fluorescence-bright spots for sensitive miRNA visualization.
Conclusions:
- ONAAs-PCMSNs provide a powerful platform for non-destructive intracellular miRNA detection.
- The developed electrostatic DNA self-assembly and HCR strategy enables sensitive and specific miRNA imaging in living cells.
- This approach holds potential for advancing diagnostics and fundamental biological research.
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