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Updated: Mar 22, 2026

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
With or without you - Proteomics with or without major plasma/serum proteins
Elisabetta Gianazza1, Ingrid Miller2, Luca Palazzolo1
1Dipartimento di Scienze Farmacologiche e Biomolecolari, Università degli Studi di Milano, Via Balzaretti 9, I-20133 Milan, Italy.
Managing plasma and serum for disease biomarkers involves specific strategies. Analyzing abundant proteins in plasma/serum offers valuable insights into disease mechanisms and implications.
Area of Science:
- Biochemistry
- Proteomics
- Biomarker Discovery
Background:
- Plasma and serum are critical sources for identifying disease biomarkers.
- Abundant protein depletion is a common but not always necessary step in sample preparation.
- Understanding the complexity of major plasma/serum proteins is essential for biomarker research.
Purpose of the Study:
- To review strategies for managing plasma/serum for biomarker discovery.
- To discuss the complexities of major plasma/serum proteins.
- To recommend routine analysis of abundant plasma/serum proteome components for disease characterization.
Main Methods:
- Compilation and discussion of existing management strategies and protocols for plasma/serum.
- Analysis of conceptual and technical approaches for using whole plasma/serum.
- Review of literature on the molecular structures and functions of major serum/plasma proteins.
Main Results:
- Effective strategies exist for using whole plasma/serum without protein depletion.
- Major plasma/serum proteins exhibit significant molecular complexity (multiple species and functions).
- The regulation of protein synthesis is linked to health and disease.
Conclusions:
- Routine analysis of abundant plasma/serum proteome components can aid disease characterization.
- Understanding protein complexity is key to unlocking their full potential as biomarkers.
- This approach enhances the understanding of disease mechanisms and their consequences.
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