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USP51 deubiquitylates H2AK13,15ub and regulates DNA damage response
Zhiquan Wang1, Honglian Zhang1, Ji Liu1
1Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, USA;
Abstract:
Dynamic regulation of RNF168-mediated ubiquitylation of histone H2A Lys13,15 (H2AK13,15ub) at DNA double-strand breaks (DSBs) is crucial for preventing aberrant DNA repair and maintaining genome stability. However, it remains unclear which deubiquitylating enzyme (DUB) removes H2AK13,15ub. Here we show that USP51, a previously uncharacterized DUB, deubiquitylates H2AK13,15ub and regulates DNA damage response. USP51 depletion results in increased spontaneous DNA damage foci and elevated levels of H2AK15ub and impairs DNA damage response. USP51 overexpression suppresses the formation of ionizing radiation-induced 53BP1 and BRCA1 but not RNF168 foci, suggesting that USP51 functions downstream from RNF168 in DNA damage response. In vitro, USP51 binds to H2A-H2B directly and deubiquitylates H2AK13,15ub. In cells, USP51 is recruited to chromatin after DNA damage and regulates the dynamic assembly/disassembly of 53BP1 and BRCA1 foci. These results show that USP51 is the DUB for H2AK13,15ub and regulates DNA damage response.
Insights
USP51, a novel deubiquitylating enzyme (DUB), removes histone H2AK13,15ub marks at DNA double-strand breaks. USP51 regulates DNA damage response and genome stability by controlling the dynamic assembly of repair proteins.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Dynamic regulation of histone ubiquitylation is critical for DNA repair and genome stability.
- Histone H2A Lys13,15 ubiquitylation (H2AK13,15ub) is mediated by RNF168 at DNA double-strand breaks (DSBs).
- The deubiquitylating enzyme (DUB) responsible for removing H2AK13,15ub has not been identified.
Purpose of the Study:
- To identify the DUB that removes H2AK13,15ub.
- To investigate the role of this DUB in DNA damage response and genome stability.
Main Methods:
- Depletion and overexpression of USP51 in human cells.
- Analysis of DNA damage foci (53BP1, BRCA1, RNF168).
- In vitro deubiquitylation assays using purified proteins.
- Chromatin recruitment assays post-DNA damage.
Main Results:
- USP51 was identified as a DUB that deubiquitylates H2AK13,15ub.
- USP51 depletion led to increased spontaneous DNA damage, elevated H2AK15ub levels, and impaired DNA damage response.
- USP51 overexpression suppressed ionizing radiation-induced 53BP1 and BRCA1 foci formation, functioning downstream of RNF168.
- USP51 directly binds H2A-H2B and deubiquitylates H2AK13,15ub in vitro.
- USP51 is recruited to chromatin after DNA damage and regulates 53BP1 and BRCA1 foci dynamics.
Conclusions:
- USP51 is the primary DUB responsible for removing H2AK13,15ub.
- USP51 plays a crucial role in regulating the DNA damage response pathway.
- USP51's function is essential for maintaining genome stability by controlling DNA repair protein dynamics.
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