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Updated: Mar 22, 2026

Comparing Bibliometric Analysis Using PubMed, Scopus, and Web of Science Databases

Comparing Bibliometric Analysis Using PubMed, Scopus, and Web of Science Databases

Published on: October 24, 2019

Scientific workflows for bibliometrics.

Arzu Tugce Guler¹, Cathelijn J F Waaijer², Magnus Palmblad¹

¹Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands.

|April 29, 2016

Summary

This summary is machine-generated.

Scientific workflows, particularly using the Taverna workbench, offer powerful tools for bibliometric analysis. This approach streamlines multi-step data analysis and integrates specialized R packages for enhanced insights.

Keywords:

Bibliometrics Mass spectrometry Medicinal chemistry R Scientific workflows Taverna XML

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Published on: August 13, 2012

Area of Science:

Bibliometrics and Scientometrics
Computational Social Science
Information Science

Background:

Scientific workflows facilitate the integration of diverse software tools for complex data analysis.
Reusability is a key feature, with platforms like myExperiment enabling workflow sharing.
Bibliometrics and scientometrics involve analyzing scientific literature and research impact.

Purpose of the Study:

To demonstrate the application of scientific workflows, specifically the Taverna workbench, in bibliometric and scientometric research.
To highlight Taverna's capabilities for automating data import, extraction, and analysis in bibliometrics.

Main Methods:

Utilizing the Taverna workbench for constructing and executing scientific workflows.
Leveraging Web services for automated data import.
Employing XML and XPaths for data extraction.
Integrating statistical analysis and visualization capabilities of the R programming language.

Main Results:

Taverna enables efficient, multi-step data processing for bibliometric tasks.
Integration with R packages allows for advanced bibliometric analysis and visualization.
Demonstrated practical examples of Taverna's utility in bibliometrics and scientometrics.

Conclusions:

The Taverna workbench is a powerful and versatile tool for bibliometric and scientometric research.
Scientific workflows enhance the reproducibility and efficiency of bibliometric analyses.
Taverna facilitates the integration of specialized tools, advancing the field of bibliometrics.