The hnRNP-Htt axis regulates necrotic cell death induced by transcriptional repression through impaired RNA splicing
1Department of Neuropathology, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo, Japan.
Abstract:
In this study, we identify signaling network of necrotic cell death induced by transcriptional repression (TRIAD) by α-amanitin (AMA), the selective RNA polymerase II inhibitor, as a model of neurodegenerative cell death. We performed genetic screen of a knockdown (KD) fly library by measuring the ratio of transformation from pupa to larva (PL ratio) under TRIAD, and selected the cell death-promoting genes. Systems biology analysis of the positive genes mapped on protein-protein interaction databases predicted the signaling network of TRIAD and the core pathway including heterogeneous nuclear ribonucleoproteins (hnRNPs) and huntingtin (Htt). RNA sequencing revealed that AMA impaired transcription and RNA splicing of Htt, which is known as an endoplasmic reticulum (ER)-stabilizing molecule. The impairment in RNA splicing and PL ratio was rescued by overexpresion of hnRNP that had been also affected by transcriptional repression. Fly genetics with suppressor or expresser of Htt and hnRNP worsened or ameliorated the decreased PL ratio by AMA, respectively. Collectively, these results suggested involvement of RNA splicing and a regulatory role of the hnRNP-Htt axis in the process of the transcriptional repression-induced necrosis.
Insights
This study reveals a signaling network for necrotic cell death triggered by transcriptional repression (TRIAD) using α-amanitin (AMA). The hnRNP-Htt axis plays a key role in this process, impacting RNA splicing and cell death.
Area of Science:
- Neuroscience
- Molecular Biology
- Genetics
Background:
- Neurodegenerative diseases involve cell death pathways.
- Transcriptional repression can induce necrotic cell death.
Purpose of the Study:
- To identify the signaling network of necrotic cell death induced by transcriptional repression (TRIAD).
- To investigate the role of heterogeneous nuclear ribonucleoproteins (hnRNPs) and huntingtin (Htt) in TRIAD.
Main Methods:
- Genetic screening of a knockdown fly library.
- Systems biology analysis of protein-protein interaction networks.
- RNA sequencing to analyze gene expression and splicing.
- Fly genetics to validate gene function.
Main Results:
- Identified a TRIAD signaling network involving hnRNPs and Htt.
- AMA impaired transcription and RNA splicing of Htt.
- Overexpression of hnRNP rescued AMA-induced defects.
- Modulating Htt and hnRNP levels affected cell death.
Conclusions:
- The hnRNP-Htt axis is involved in TRIAD.
- RNA splicing plays a critical role in transcriptional repression-induced necrosis.
- This study provides insights into neurodegenerative cell death mechanisms.
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