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Updated: Mar 22, 2026

Ischemia-reperfusion Model of Acute Kidney Injury and Post Injury Fibrosis in Mice
Published on: August 9, 2013
Histone lysine crotonylation during acute kidney injury in mice
Olga Ruiz-Andres1, Maria Dolores Sanchez-Niño1, Pablo Cannata-Ortiz2
1Nephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain REDinREN, Madrid 28040, Spain.
Abstract:
Acute kidney injury (AKI) is a potentially lethal condition for which no therapy is available beyond replacement of renal function. Post-translational histone modifications modulate gene expression and kidney injury. Histone crotonylation is a recently described post-translational modification. We hypothesized that histone crotonylation might modulate kidney injury. Histone crotonylation was studied in cultured murine proximal tubular cells and in kidneys from mice with AKI induced by folic acid or cisplatin. Histone lysine crotonylation was observed in tubular cells from healthy murine and human kidney tissue. Kidney tissue histone crotonylation increased during AKI. This was reproduced by exposure to the protein TWEAK in cultured tubular cells. Specifically, ChIP-seq revealed enrichment of histone crotonylation at the genes encoding the mitochondrial biogenesis regulator PGC-1α and the sirtuin-3 decrotonylase in both TWEAK-stimulated tubular cells and in AKI kidney tissue. To assess the role of crotonylation in kidney injury, crotonate was used to increase histone crotonylation in cultured tubular cells or in the kidneys in vivo Crotonate increased the expression of PGC-1α and sirtuin-3, and decreased CCL2 expression in cultured tubular cells and healthy kidneys. Systemic crotonate administration protected from experimental AKI, preventing the decrease in renal function and in kidney PGC-1α and sirtuin-3 levels as well as the increase in CCL2 expression. For the first time, we have identified factors such as cell stress and crotonate availability that increase histone crotonylation in vivo Overall, increasing histone crotonylation might have a beneficial effect on AKI. This is the first observation of the in vivo potential of the therapeutic manipulation of histone crotonylation in a disease state.
Insights
Histone crotonylation, a new modification, increases during acute kidney injury (AKI). Increasing this histone modification protected against AKI in mice, suggesting a potential new therapy for kidney disease.
Area of Science:
- Biochemistry
- Molecular Biology
- Nephrology
Background:
- Acute kidney injury (AKI) lacks effective treatments beyond renal replacement therapy.
- Post-translational histone modifications influence gene expression and kidney injury.
- Histone crotonylation is a newly identified histone modification.
Purpose of the Study:
- To investigate the role of histone crotonylation in kidney injury.
- To explore the therapeutic potential of modulating histone crotonylation in AKI.
Main Methods:
- Histone crotonylation was analyzed in cultured kidney cells and mouse models of AKI (folic acid and cisplatin induced).
- Chromatin immunoprecipitation sequencing (ChIP-seq) identified genes associated with histone crotonylation.
- Crotonate was administered in vitro and in vivo to modulate histone crotonylation levels.
Main Results:
- Histone crotonylation was detected in healthy kidney cells and increased during AKI.
- ChIP-seq showed enrichment of histone crotonylation at genes regulating mitochondrial biogenesis (PGC-1α) and histone decrotonylation (sirtuin-3).
- Crotonate administration increased PGC-1α and sirtuin-3 expression, decreased CCL2 expression, and protected against experimental AKI.
Conclusions:
- Histone crotonylation is present in kidney tissue and is upregulated during AKI.
- Modulating histone crotonylation, for example, by administering crotonate, shows therapeutic potential for AKI.
- This study is the first to demonstrate the in vivo therapeutic potential of manipulating histone crotonylation in a disease context.
Related Concept Videos
Acute Kidney Injury I: Introduction
Acute Kidney Injury IV: Diagnostic Studies and Prevention
Acute Kidney Injury II: Pathophysiology
Acute Kidney Injury III: Clinical Manifestations
Acute Kidney Injury V: Interprofessional Care

