Related Experiment Video
Updated: Mar 20, 2026

DNA Electrophoresis Using Thiazole Orange Instead of Ethidium Bromide or Alternative Dyes
Published on: March 31, 2019
Thiazine dyes: Evaluation of monomeric and aggregate forms
Jimena Vara1, Cristina S Ortiz1
1Departamento de Farmacia, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, X5000HUA Córdoba, Argentina.
This study reveals new monomeric species of Azure B and related dyes in organic solvents, correcting prior literature. It also demonstrates diverse aggregate formation in water, clarifying thiazine dye aggregation tendencies.
Area of Science:
- Photochemistry
- Physical Chemistry
- Dye Chemistry
Background:
- Thiazine dyes like Azure B, Thionine, and Methylene Blue are widely used but their aggregation behavior is not fully understood.
- Previous studies may have misidentified monomeric species in certain conditions.
Purpose of the Study:
- To investigate the aggregation phenomenon of Azure B, monobrominated Azure B, Thionine, and Methylene Blue.
- To identify and characterize monomeric species in organic solvents.
- To elucidate the types of aggregates formed in aqueous media and establish aggregation tendencies.
Main Methods:
- UV-Visible spectrophotometry was employed to study dye aggregation.
- Experiments were conducted in various media (organic solvents and water).
- Dye concentration and temperature were varied to observe aggregation changes.
Main Results:
- Monomeric species of Azure B and related dyes were identified in organic solvents, challenging previous assignments.
- Multiple types of dye aggregates were observed in aqueous solutions.
- The aggregation tendency of these thiazine dyes in both organic and aqueous environments was determined.
Conclusions:
- The study provides a revised understanding of thiazine dye speciation in different media.
- Accurate identification of monomeric forms and characterization of aggregates are crucial for understanding dye behavior.
- Factors like lipophilicity, substituents, and solvent interactions influence thiazine dye aggregation.
Related Concept Videos
Aryldiazonium Salts to Azo Dyes: Diazo Coupling
Diazonium Group Substitution: –OH and –H
Diazonium Group Substitution with Halogens and Cyanide: Sandmeyer and Schiemann Reactions

