Impact of disease-causing mutations on inter-domain interactions in cMyBP-C: a steered molecular dynamics study
Related Experiment Video
Updated: Mar 19, 2026

Exploring Caspase Mutations and Post-Translational Modification by Molecular Modeling Approaches
Published on: October 13, 2022
Navaneethakrishnan Krishnamoorthy1,2,3, Poornima Gajendrarao1,3, Iacopo Olivotto4
1a Qatar Cardiovascular Research Centre , Qatar Foundation , Doha , Qatar.
Insights
Cardiac myosin-binding protein-C (cMyBP-C) mutations cause hypertrophic cardiomyopathy (HCM). This study reveals how mutations alter cMyBP-C domain unbinding, impacting cardiac function and HCM severity.
Area of Science:
- Cardiovascular biology
- Molecular cardiology
- Biophysics
Background:
- Sarcomeric protein interactions regulate cardiac function.
- Mutations in MYBPC3, encoding cardiac myosin-binding protein-C (cMyBP-C), are a leading cause of hypertrophic cardiomyopathy (HCM).
- The N-terminal C1-C2 complex of cMyBP-C is crucial for cardiac muscle contraction regulation, but its unbinding mechanisms in health and disease remain unclear.
Purpose of the Study:
- To investigate the molecular mechanisms of C1-C2 complex unbinding in wild-type and hypertrophic cardiomyopathy (HCM)-associated mutant forms of cMyBP-C.
- To elucidate how specific mutations (E258K in C1, E441K in C2, and a double mutation) affect the stability and unbinding dynamics of the cMyBP-C N-terminal complex.
Main Methods:
- Utilized steered molecular dynamics (SMD) simulations to model the unbinding pathways of the cMyBP-C C1-C2 complex.
- Simulated wild-type, single (E258K in C1, E441K in C2), and double (E258K in C1 + E441K in C2) mutant complexes.
- Calculated the force required for domain unbinding to quantify changes in complex stability.
Main Results:
- The double mutation results in a more rigid complex, requiring significantly higher force and longer simulation times for unbinding.
- Unbinding initiates with the C1 domain preceding the C2 domain, irrespective of the mutation.
- The C2 domain consistently requires greater force to unbind compared to the C1 domain across all simulated conditions.
Conclusions:
- HCM-associated mutations in cMyBP-C can alter the native binding affinity of its N-terminal domains.
- These alterations in domain assembly and stability are critical for normal cardiac function and may underlie HCM pathogenesis.
- Understanding these molecular unbinding mechanisms provides insight into HCM development and potential therapeutic targets.
Abstract:
The molecular interactions of the sarcomeric proteins are essential in the regulation of various cardiac functions. Mutations in the gene MYBPC3 coding for cardiac myosin-binding protein-C (cMyBP-C), a multi-domain protein, are the most common cause of hypertrophic cardiomyopathy (HCM). The N-terminal complex, C1-motif-C2 is a central region in cMyBP-C for the regulation of cardiac muscle contraction. However, the mechanism of binding/unbinding of this complex during health and disease is unknown. Here, we study possible mechanisms of unbinding using steered molecular dynamics simulations for the complex in the wild type, in single mutations (E258K in C1, E441K in C2), as well as in a double mutation (E258K in C1 + E441K in C2), which are associated with severe HCM. The observed molecular events and the calculation of force utilized for the unbinding suggest the following: (i) double mutation can encourage the formation of rigid complex that required large amount of force and long-time to unbind, (ii) C1 appears to start to unbind ahead of C2 regardless of the mutation, and (iii) unbinding of C2 requires larger amount of force than C1. This molecular insight suggests that key HCM-causing mutations might significantly modify the native affinity required for the assembly of the domains in cMyBP-C, which is essential for normal cardiac function.
Related Concept Videos
Mismatch Repair
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Mismatch Repair
Covalently Linked Protein Regulators
These groups modify specific amino acids in a protein....
Mutations in Microorganisms
Mutations
Mutations
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...

