Related Experiment Video
Updated: Mar 18, 2026

A Neonatal Imaging Model of Gram-Negative Bacterial Sepsis
Published on: August 12, 2020
Gut bacteria and late-onset neonatal bloodstream infections in preterm infants
Phillip I Tarr1, Barbara B Warner2
1Division of Gastroenterology, Hepatology, and Nutrition, Pathobiology Research Unit, Department of Pediatrics, Washington University School of Medicine, St Louis, MO, USA.
Insights
Late-onset neonatal bloodstream infections are often caused by gut bacteria. New strategies are needed to prevent these infections by understanding pathogen origins beyond just line care.
Area of Science:
- Neonatology
- Infectious Diseases
- Microbiology
Background:
- Late-onset neonatal bloodstream infections (LONSIs) pose significant challenges in neonatology.
- Current interventions like hand hygiene and line care may not fully address LONSIs originating from gut bacteria.
Purpose of the Study:
- To explore the gut origin of pathogens causing LONSIs.
- To propose a shift from a host-centric to a bacteria-centric paradigm for understanding LONSIs.
- To advocate for proactive strategies targeting pathogen habitats.
Main Methods:
- Review of accumulating data on LONSIs pathogens.
- Analysis of host-canonical versus bacteria-canonical paradigms.
- Consideration of pre-invasive pathogen habitats.
Main Results:
- Many pathogens causing LONSIs are of gut origin, including Gram-positive cocci.
- LONSIs may be influenced by specific bacterial strains with high invasive potential.
- Current reactive approaches are insufficient.
Conclusions:
- A broader approach beyond line care is necessary to reduce LONSIs.
- Understanding the pre-invasive habitat of gut pathogens is crucial for prevention.
- Shifting focus to bacteria-canonical paradigms may offer new prevention strategies.
Abstract:
Late-onset neonatal bloodstream infections remain challenges in neonatology. Hand hygiene, line care, and judicious use of indwelling lines are welcome interventions, but might not reduce the incidence of late-onset neonatal bloodstream infections from bacteria originating in the gut. Accumulating data suggest that many pathogens causing late-onset neonatal bloodstream infections are of gut origin, including Gram-positive cocci. In addition to the host-canonical paradigm (i.e., all bacteria have equal risk of invasion and bloodstream infections are functions of variable infant susceptibility), we should now consider bacteria-canonical paradigms, whereby late-onset neonatal bloodstream infection is a function of colonization with a specific subset of bacteria with exceptional invasive potential. In either event, we can no longer be content to reactively approach late-onset neonatal bloodstream infections; instead we need to reduce the occurrences of these infections by broadening our scope of effort beyond line care, and determine the pre-invasive habitat of these pathogens.
Related Concept Videos
Development of Human Microbiota
Development of the Oral Microbiota
Anatomy of the Intestines
Small Intestines
The small intestine is an ~7 meter-long tube with an inner diameter of just 2.5 cm. Since most nutrients are absorbed here, the inner lining of the...
Introduction to the Human Microbiota
Gut-Brain Axis
Microbiota of the Respiratory Tract

