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The group Stramenopiles include some phototrophic microorganisms. Members of this group possess flagella covered in numerous short, hairlike extensions, a feature that inspired the group's name, derived from the Latin words for "straw" and "hair." Some of the main categories of Stramenopiles include diatoms, golden algae, and brown algae.Diatoms are unicellular, photosynthetic eukaryotes, with over 200 known genera. They play a key role in the planktonic communities of both marine and...
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Updated: Mar 16, 2026

Cultivation of Green Microalgae in Bubble Column Photobioreactors and an Assay for Neutral Lipids
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Can spherical eukaryotic microalgae cells be treated as optically homogeneous?

Arka Bhowmik, Laurent Pilon

    Journal of the Optical Society of America. A, Optics, Image Science, and Vision
    |August 10, 2016
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    Microalgae cells can be modeled as homogeneous spheres for optical properties, accurately estimating spectral absorption and scattering. However, complex models are needed to capture all radiation characteristics, especially with distinct cell walls.

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    Area of Science:

    • Optics and photonics
    • Microbiology
    • Biophysics

    Background:

    • Microalgae are crucial photoautotrophs with complex internal structures affecting light interaction.
    • Understanding microalgal optical properties is vital for applications in biofuels, biotechnology, and remote sensing.
    • Heterogeneous cell structures pose challenges for accurate optical modeling.

    Purpose of the Study:

    • To determine if microalgae can be simplified as homogeneous spheres for optical modeling.
    • To investigate the impact of intracellular compartments and stress-induced changes on spectral radiation characteristics.
    • To compare simplified models with heterogeneous cell behavior using experimental data.

    Main Methods:

    • Utilized the superposition T-matrix method to estimate spectral radiation characteristics.
    • Modeled microalgae as homogeneous spheres and coated spheres with effective refractive indices.
    • Explored the effects of intracellular lipids and starch accumulation due to nitrogen limitation.
    • Investigated the optical properties of cells with strongly refracting cell walls.

    Main Results:

    • The homogeneous sphere approximation accurately estimated spectral absorption and scattering cross-sections.
    • Volume-averaged effective complex refractive index provided good approximations for nitrogen-replete and limited conditions.
    • A coated sphere model was more appropriate for cells with strongly refracting cell walls.
    • Both simplified models failed to predict resonances observed in heterogeneous cells.

    Conclusions:

    • Microalgae can be approximated as homogeneous spheres for basic optical property estimation.
    • Simplified models are useful but may not capture all spectral radiation nuances, especially scattering.
    • Accurate modeling requires considering cell wall properties and internal heterogeneity for specific applications.