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Updated: Mar 16, 2026

Deep Learning-Based Segmentation of Cryo-Electron Tomograms
Published on: November 11, 2022
A simple and fast approach for missing-wedge invariant classification of subtomograms extracted from filamentous
Jagan Mohan Obbineni1, Ryosuke Yamamoto2, Takashi Ishikawa1
1Laboratory of Biomolecular Research, Paul Scherrer Institute and Department of Biology, ETH Zurich, Switzerland.
Abstract:
Unsupervised classification of subtomograms extracted from cryo-electron tomograms is often challenging due to the presence of a missing wedge in tomographic data. Here, we propose a simple new approach to classify subtomograms extracted from cryo-electron tomograms of filamentous objects. This unsupervised classification approach uses the 1D projections of the subtomograms for classification and works independently of the orientations of the missing wedge. We applied this approach to subtomograms from eukaryotic cilia and successfully detected heterogeneity including structural polymorphism of dynein molecules.

