Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Video

Updated: Mar 15, 2026

Constructing Cyclic Peptides Using an On-Tether Sulfonium Center
07:11

Constructing Cyclic Peptides Using an On-Tether Sulfonium Center

Published on: September 28, 2022

3.2K

Computational methods to design cyclic peptides.

Sean M McHugh1, Julia R Rogers1, Sarah A Solomon1

  • 1Department of Chemistry, Tufts University, Medford, MA 02155, United States.

Current Opinion in Chemical Biology
|September 5, 2016
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Hippocampal Glutamatergic Hyperactivation Mediates High-Loading Intensity of Exercise-Induced Cognitive Deficits Via HPC-mPFC Circuit Dysfunction.

CNS neuroscience & therapeutics·2026
Same author

Allosteric Inhibition of Polycomb Repressive Complex 2 by an EZH2-Selective Small Molecule Inhibitor.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)·2026
Same author

Shear wave elastography-based predictive model for early functional recovery following extensor tendon repair of the hand.

BMC medical imaging·2026
Same author

Maximum likelihood estimation of perceptual differences in sorting tasks.

PloS one·2026
Same author

Laroprovstat, the First Oral Small-Molecule PCSK9 Inhibitor for the Treatment of Hypercholesterolemia: Results From a Randomized, Single-Blind, Placebo-Controlled Phase 1 Trial in Treatment-Naïve Patients.

Circulation·2026
Same author

Corrigendum to "Enhanced electric field intensity in transverse microchannel charcoal electrode for facilitating electrochemical demulsification rate of oil-in-water droplets" [J Hazard Mater 511 (2026) 142186].

Journal of hazardous materials·2026
Same journal

Function through shape: An overview of DNA G-quadruplexes in transcriptional regulation.

Current opinion in chemical biology·2026
Same journal

Advances in tools and technologies for multiplexed bioluminescence imaging.

Current opinion in chemical biology·2026
Same journal

High-resolution molecular mapping by expansion-coupled label-free and multimodal imaging.

Current opinion in chemical biology·2026
Same journal

Recent advances in glycoconjugate-based therapeutics.

Current opinion in chemical biology·2026
Same journal

Towards better red emitters for bioimaging: Innovations in rhodamine and cyanine chemistry.

Current opinion in chemical biology·2026
Same journal

Chemigenetic fluorescent biosensors in biological imaging - New trends and advances.

Current opinion in chemical biology·2026
See all related articles

Computational methods are advancing cyclic peptide (CP) design for protein-protein interaction (PPI) modulation. Overcoming challenges in predicting CP structure and energetics is key for developing therapeutics.

Area of Science:

  • Medicinal Chemistry
  • Computational Biology
  • Biochemistry

Background:

  • Cyclic peptides (CPs) show potential as modulators of protein-protein interactions (PPIs).
  • Current limitations in predicting CP structure and bioavailability hinder their therapeutic development.
  • Computer-aided design of CPs could accelerate their use in research and medicine.

Purpose of the Study:

  • To describe computational methods for generating cyclic peptide libraries for virtual screening.
  • To highlight current efforts in predicting the conformations of cyclic peptides.
  • To outline the path towards robust computational design of active cyclic peptides.

Main Methods:

  • Generation of cyclic peptide libraries for virtual screening.
  • Computational approaches for predicting cyclic peptide conformations.

More Related Videos

Constructing Thioether/Vinyl Sulfide-tethered Helical Peptides Via Photo-induced Thiol-ene/yne Hydrothiolation
11:09

Constructing Thioether/Vinyl Sulfide-tethered Helical Peptides Via Photo-induced Thiol-ene/yne Hydrothiolation

Published on: August 1, 2018

11.3K
Construction of Cyclic Cell-Penetrating Peptides for Enhanced Penetration of Biological Barriers
10:12

Construction of Cyclic Cell-Penetrating Peptides for Enhanced Penetration of Biological Barriers

Published on: September 19, 2022

2.9K

Related Experiment Videos

Last Updated: Mar 15, 2026

Constructing Cyclic Peptides Using an On-Tether Sulfonium Center
07:11

Constructing Cyclic Peptides Using an On-Tether Sulfonium Center

Published on: September 28, 2022

3.2K
Constructing Thioether/Vinyl Sulfide-tethered Helical Peptides Via Photo-induced Thiol-ene/yne Hydrothiolation
11:09

Constructing Thioether/Vinyl Sulfide-tethered Helical Peptides Via Photo-induced Thiol-ene/yne Hydrothiolation

Published on: August 1, 2018

11.3K
Construction of Cyclic Cell-Penetrating Peptides for Enhanced Penetration of Biological Barriers
10:12

Construction of Cyclic Cell-Penetrating Peptides for Enhanced Penetration of Biological Barriers

Published on: September 19, 2022

2.9K
  • Analysis of challenges in sampling conformational space and energetics of cyclic peptides.
  • Main Results:

    • Development of computational methods for CP library generation and virtual screening.
    • Progress in predicting CP conformations, enabling envisioning of computational design.
    • Identification of significant challenges in CP conformational sampling and energetic prediction.

    Conclusions:

    • Advances in computational methods are paving the way for designing cyclic peptides.
    • Accurate prediction of CP structure and energetics remains a critical hurdle.
    • Solving these challenges is essential for reliable design of potent cyclic peptide therapeutics.