Draft genome sequence of a CTX-M-15-producing Klebsiella pneumoniae sequence type 340 (clonal complex 258) isolate

Louise Cerdeira1, Ketrin C Silva2, Miriam R Fernandes1

  • 1Department of Clinical Analysis, School of Pharmacy, Universidade de São Paulo, São Paulo, Brazil.

Insights

This study presents the first genome sequence of a CTX-M-15 producing Klebsiella pneumoniae ST340 strain from a food-producing animal in Brazil. This finding highlights the potential for broader dissemination of this important pathogen beyond clinical settings.

Area of Science:

  • Microbiology
  • Genomics
  • Antimicrobial Resistance

Background:

  • Klebsiella pneumoniae strains carrying the blaCTX-M-15 gene are prevalent in healthcare environments.
  • Clinically significant strains often belong to clonal complex 28 (CC258), including sequence type 340 (ST340).

Purpose of the Study:

  • To describe the draft genome sequence of a blaCTX-M-15-producing ST340 Klebsiella pneumoniae strain.
  • To investigate the genetic characteristics of this strain isolated from a food-producing animal in Brazil.

Main Methods:

  • Whole-genome sequencing of the Klebsiella pneumoniae isolate.
  • Bioinformatic analysis to determine sequence type and identify antimicrobial resistance genes.

Main Results:

  • The study successfully generated the draft genome sequence of the targeted strain.
  • Confirmation of the presence of the blaCTX-M-15 gene and ST340 designation.
  • Identification of the isolate from a food-producing animal source in Brazil.

Conclusions:

  • The genome sequence provides valuable data on the genetic makeup of this important strain.
  • The isolation from a food-producing animal suggests potential transmission routes and broader ecological distribution.
  • This highlights the need for surveillance of antimicrobial resistance in both clinical and animal settings.