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Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
Decreased Expression of SRSF2 Splicing Factor Inhibits Apoptotic Pathways in Renal Cancer
Hanna Kędzierska1, Piotr Popławski2, Grażyna Hoser3
1Department of Biochemistry and Molecular Biology, Centre of Postgraduate Medical Education, 01-813 Warsaw, Poland. hanna.kedzierska@cmkp.edu.pl.
Abstract:
Serine and arginine rich splicing factor 2(SRSF2) belongs to the serine/arginine (SR)-rich family of proteins that regulate alternative splicing. Previous studies suggested that SRSF2 can contribute to carcinogenic processes. Clear cell renal cell carcinoma (ccRCC) is the most common subtype of kidney cancer, highly aggressive and difficult to treat, mainly due to resistance to apoptosis. In this study we hypothesized that SRSF2 contributes to the regulation of apoptosis in ccRCC. Using tissue samples obtained from ccRCC patients, as well as independent validation on The Cancer Genome Atlas (TCGA) data, we demonstrate for the first time that expression of SRSF2 is decreased in ccRCC tumours when compared to non-tumorous control tissues. Furthermore, by employing a panel of ccRCC-derived cell lines with silenced SRSF2 expression and qPCR arrays we show that SRSF2 contributes not only to splicing patterns but also to expression of multiple apoptotic genes, including new SRSF2 targets: DIABLO, BIRC5/survivin, TRAIL, BIM, MCL1, TNFRSF9, TNFRSF1B, CRADD, BCL2L2, BCL2A1, and TP53. We also identified a new splice variant of CFLAR, an inhibitor of caspase activity. These changes culminate in diminished caspase-9 activity and inhibition of apoptosis. In summary, we show for the first time that decreased expression of SRSF2 in ccRCC contributes to protection of cancer cells viability.
Insights
Decreased serine and arginine rich splicing factor 2 (SRSF2) expression in clear cell renal cell carcinoma (ccRCC) impairs apoptosis. This study reveals SRSF2
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Clear cell renal cell carcinoma (ccRCC) is an aggressive kidney cancer subtype known for apoptosis resistance.
- Serine and arginine rich splicing factor 2 (SRSF2) is an SR protein family member involved in alternative splicing.
- Previous research suggests a role for SRSF2 in carcinogenesis.
Purpose of the Study:
- To investigate the role of SRSF2 in regulating apoptosis in ccRCC.
- To determine if SRSF2 expression levels correlate with ccRCC tumor characteristics.
Main Methods:
- Analysis of SRSF2 expression in ccRCC patient tissue samples and The Cancer Genome Atlas (TCGA) data.
- Utilized ccRCC cell lines with silenced SRSF2 expression.
- Employed quantitative PCR (qPCR) arrays to assess gene expression and splicing patterns.
Main Results:
- SRSF2 expression is significantly decreased in ccRCC tumors compared to non-tumorous tissues.
- SRSF2 silencing affects splicing and expression of multiple pro-apoptotic genes, including novel targets like DIABLO, BIRC5/survivin, and TP53.
- A new splice variant of CFLAR was identified, leading to reduced caspase-9 activity and inhibited apoptosis, promoting cancer cell survival.
Conclusions:
- Reduced SRSF2 expression in ccRCC contributes to the protection of cancer cell viability by inhibiting apoptosis.
- SRSF2 plays a critical role in regulating apoptotic pathways in clear cell renal cell carcinoma.
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