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A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
Published on: May 27, 2021
PARP1 inhibitor olaparib (Lynparza) exerts synthetic lethal effect against ligase 4-deficient melanomas
Małgorzata Czyż1, Monika Toma2, Anna Gajos-Michniewicz1
1Department of Molecular Biology of Cancer, Medical University of Lodz, 92-215 Lodz, Poland.
Abstract:
Cancer including melanoma may be ''addicted" to double strand break (DSB) repair and targeting this process could sensitize them to the lethal effect of DNA damage. PARP1 exerts an important impact on DSB repair as it binds to both single- and double- strand breaks. PARP1 inhibitors might be highly effective drugs triggering synthetic lethality in patients whose tumors have germline or somatic defects in DNA repair genes. We hypothesized that PARP1-dependent synthetic lethality could be induced in melanoma cells displaying downregulation of DSB repair genes. We observed that PARP1 inhibitor olaparib sensitized melanomas with reduced expression of DNA ligase 4 (LIG4) to an alkylatimg agent dacarbazine (DTIC) treatment in vitro, while normal melanocytes remained intact. PARP1 inhibition caused accumulation of DSBs, which was associated with apoptosis in LIG4 deficient melanoma cells. Our hypothesis that olaparib is synthetic lethal with LIG4 deficiency in melanoma cells was supported by selective anti-tumor effects of olaparib used either alone or in combination with dacarbazine (DTIC) in LIG4 deficient, but not LIG4 proficient cells. In addition, olaparib combined with DTIC inhibited the growth of LIG4 deficient human melanoma xenografts. This work for the first time demonstrates the effectiveness of a combination of PARP1 inhibitor olaparib and alkylating agent DTIC for treating LIG4 deficient melanomas. In addition, analysis of the TCGA and transcriptome microarray databases revealed numerous individual melanoma samples potentially displaying specific defects in DSB repair pathways, which may predispose them to synthetic lethality triggered by PARP1 inhibitor combined with a cytotoxic drug.
Insights
PARP1 inhibitors like olaparib show synthetic lethality in melanoma cells with DNA ligase 4 (LIG4) defects. This combination therapy targets double strand break (DSB) repair, offering a new strategy for LIG4-deficient melanoma treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Cancer cells, including melanoma, often rely on DNA repair mechanisms like double-strand break (DSB) repair.
- Targeting DSB repair pathways can sensitize cancer cells to DNA-damaging agents.
- Poly(ADP-ribose) polymerase 1 (PARP1) plays a crucial role in DSB repair and is a target for cancer therapy.
Purpose of the Study:
- To investigate the potential of PARP1 inhibitors to induce synthetic lethality in melanoma cells with defects in DSB repair genes.
- To evaluate the efficacy of combining a PARP1 inhibitor (olaparib) with an alkylating agent (dacarbazine) in LIG4-deficient melanoma models.
Main Methods:
- In vitro studies using melanoma cell lines with varying DNA ligase 4 (LIG4) expression levels treated with olaparib and dacarbazine.
- Assessment of double-strand break accumulation and apoptosis induction.
- In vivo studies using human melanoma xenografts in mouse models.
- Bioinformatic analysis of TCGA and microarray databases for DSB repair gene expression in melanoma.
Main Results:
- Olaparib sensitized LIG4-deficient melanoma cells to dacarbazine, leading to increased DSBs and apoptosis, while sparing normal melanocytes.
- Selective anti-tumor effects were observed with olaparib (alone or with dacarbazine) in LIG4-deficient melanoma cells and xenografts.
- Database analysis identified potential melanoma patient populations with DSB repair defects susceptible to this combination therapy.
Conclusions:
- The combination of PARP1 inhibitor olaparib and dacarbazine demonstrates effectiveness in treating LIG4-deficient melanomas.
- This study provides a rationale for targeting synthetic lethality in melanoma by combining PARP1 inhibitors with cytotoxic drugs in patients with specific DNA repair defects.
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