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High Throughput Co-culture Assays for the Investigation of Microbial Interactions
Published on: October 15, 2019
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Antibiotics in microbial coculture
1Life Science Research Center, College of Bioresource Sciences, Nihon University, Fujisawa, Japan.
The Journal of Antibiotics
|October 21, 2016
Summary
Discovering new antibiotics is challenging as many genes remain inactive. Cocultivation of microbial strains can activate these silent genes, leading to the production of novel antibiotic compounds for drug discovery.
Area of Science:
- Microbiology
- Drug Discovery
- Genomics
Background:
- Declining discovery rates of new antibiotics from microbial cultures.
- Genomic data reveals numerous unexpressed genes for metabolite synthesis in microbes.
- Need for novel cultivation strategies to activate dormant biosynthetic pathways.
Purpose of the Study:
- To review the potential of microbial cocultivation for antibiotic discovery.
- To explore how inter-species interactions can overcome limitations in pure culture antibiotic production.
- To identify factors that induce the expression of silent antibiotic biosynthetic genes.
Main Methods:
- Literature review of studies on microbial cocultivation and antibiotic production.
- Analysis of evidence supporting cocultivation as a method for stimulating secondary metabolite synthesis.
- Examination of genomic insights into silent gene clusters.
Main Results:
- Cocultivation of multiple microbial strains is an effective strategy to induce antibiotic production.
- Many antibiotic biosynthetic gene clusters remain silent under standard laboratory conditions.
- Interactions between different microbial species can trigger the expression of these silent genes.
Conclusions:
- Microbial cocultivation offers a promising avenue for discovering novel antibiotics.
- Understanding the molecular mechanisms and signaling molecules involved in cocultivation is crucial for optimizing drug discovery efforts.
- This approach can help revitalize the pipeline for new antimicrobial agents.
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