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Updated: Mar 13, 2026

High-throughput Purification of Affinity-tagged Recombinant Proteins
Published on: August 26, 2012
High-throughput purification of recombinant proteins using self-cleaving intein tags
M J Coolbaugh1, M J Shakalli Tang2, D W Wood2
1Process Development, Sanofi-Genzyme, 31 New York Ave, Framingham, MA 01701, USA.
Researchers developed a simple, cost-effective method for producing highly pure, untagged recombinant proteins using self-cleaving intein tags in a microtiter plate format. This high throughput technique streamlines protein purification for various applications.
Area of Science:
- Biotechnology
- Molecular Biology
- Protein Expression
Background:
- High throughput recombinant protein production often relies on affinity tags for purification.
- Tag removal can be unpredictable and challenging, complicating downstream applications.
Purpose of the Study:
- To develop and validate high throughput methods for producing untagged recombinant proteins.
- To utilize self-cleaving intein tags for simplified and efficient protein purification.
Main Methods:
- Employed self-cleaving chitin-binding domain (CBD) and elastin-like polypeptide (ELP) intein tags.
- Purified model proteins (E. coli beta-galactosidase and sfGFP) in a 96-well filter plate format.
- Validated the method in a high throughput expression platform using 24-well plates.
Main Results:
- Achieved >90% pure untagged protein product in a single purification step.
- Demonstrated low well-to-well and plate-to-plate variability across multiple targets and tags.
- Successfully scaled down the intein purification scheme for high throughput applications.
Conclusions:
- The developed intein-based method enables reproducible production of highly pure untagged recombinant proteins.
- This approach offers a simple, cost-effective, and convenient alternative to traditional tagged protein purification.
- The microtiter plate format is suitable for high throughput screening and production.
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