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A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
The Potent ALK Inhibitor Brigatinib (AP26113) Overcomes Mechanisms of Resistance to First- and Second-Generation ALK
Sen Zhang1, Rana Anjum1, Rachel Squillace1
1ARIAD Pharmaceuticals, Inc, Cambridge, Massachusetts.
Purpose:
Non-small cell lung cancers (NSCLCs) harboring ALK gene rearrangements (ALK+) typically become resistant to the first-generation anaplastic lymphoma kinase (ALK) tyrosine kinase inhibitor (TKI) crizotinib through development of secondary resistance mutations in ALK or disease progression in the brain. Mutations that confer resistance to second-generation ALK TKIs ceritinib and alectinib have also been identified. Here, we report the structure and first comprehensive preclinical evaluation of the next-generation ALK TKI brigatinib.
Experimental Design:
A kinase screen was performed to evaluate the selectivity profile of brigatinib. The cellular and in vivo activities of ALK TKIs were compared using engineered and cancer-derived cell lines. The brigatinib-ALK co-structure was determined.
Results:
Brigatinib potently inhibits ALK and ROS1, with a high degree of selectivity over more than 250 kinases. Across a panel of ALK+ cell lines, brigatinib inhibited native ALK (IC50, 10 nmol/L) with 12-fold greater potency than crizotinib. Superior efficacy of brigatinib was also observed in mice with ALK+ tumors implanted subcutaneously or intracranially. Brigatinib maintained substantial activity against all 17 secondary ALK mutants tested in cellular assays and exhibited a superior inhibitory profile compared with crizotinib, ceritinib, and alectinib at clinically achievable concentrations. Brigatinib was the only TKI to maintain substantial activity against the most recalcitrant ALK resistance mutation, G1202R. The unique, potent, and pan-ALK mutant activity of brigatinib could be rationalized by structural analyses.
Conclusions:
Brigatinib is a highly potent and selective ALK inhibitor. These findings provide the molecular basis for the promising activity being observed in ALK+, crizotinib-resistant patients with NSCLC being treated with brigatinib in clinical trials. Clin Cancer Res; 22(22); 5527-38. ©2016 AACR.
Insights
Brigatinib is a potent and selective next-generation ALK inhibitor that shows superior efficacy against ALK-positive non-small cell lung cancer, including resistant mutations. This offers a promising new treatment option for patients resistant to earlier therapies.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- Non-small cell lung cancer (NSCLC) with ALK gene rearrangements (ALK+) often develops resistance to crizotinib, a first-generation ALK tyrosine kinase inhibitor (TKI).
- Secondary mutations in ALK and brain metastases are common mechanisms of resistance to existing ALK TKIs.
- There is a need for next-generation ALK TKIs effective against resistant mutations and brain disease.
Purpose of the Study:
- To conduct the first comprehensive preclinical evaluation of brigatinib, a next-generation ALK TKI.
- To assess the structure, selectivity, and in vitro and in vivo activity of brigatinib.
- To compare brigatinib's efficacy against ALK-resistant mutations relative to other ALK TKIs.
Main Methods:
- Kinase screening was performed to determine brigatinib's selectivity profile.
- Cellular and in vivo assays were used to compare the activities of brigatinib and other ALK TKIs.
- The co-structure of brigatinib bound to ALK was determined.
Main Results:
- Brigatinib demonstrated potent inhibition of ALK and ROS1 with high selectivity (>250 kinases).
- Brigatinib showed 12-fold greater potency than crizotinib against ALK+ cell lines and superior efficacy in preclinical models, including brain metastases.
- Brigatinib maintained activity against all tested ALK resistance mutations, including the G1202R mutation, outperforming crizotinib, ceritinib, and alectinib.
Conclusions:
- Brigatinib is a highly potent and selective ALK inhibitor with broad activity against ALK mutations.
- Structural analyses support brigatinib's unique inhibitory profile against resistant ALK mutants.
- These preclinical findings provide a strong rationale for the clinical activity observed in ALK+ NSCLC patients resistant to crizotinib.
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