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Updated: Mar 12, 2026

Quantitation of Protein Expression and Co-localization Using Multiplexed Immuno-histochemical Staining and Multispectral Imaging
Published on: April 8, 2016
Multi-scale learning based segmentation of glands in digital colonrectal pathology images
Yi Gao1, William Liu2, Shipra Arjun3
1Department of Biomedical Informatics, Stony Brook University, NY, U.S.A; Department of Applied Mathematics & Statistics, Stony Brook University, NY, U.S.A; Department of Computer Science, Stony Brook University, NY, U.S.A.
Abstract:
Digital histopathological images provide detailed spatial information of the tissue at micrometer resolution. Among the available contents in the pathology images, meso-scale information, such as the gland morphology, texture, and distribution, are useful diagnostic features. In this work, focusing on the colon-rectal cancer tissue samples, we propose a multi-scale learning based segmentation scheme for the glands in the colon-rectal digital pathology slides. The algorithm learns the gland and non-gland textures from a set of training images in various scales through a sparse dictionary representation. After the learning step, the dictionaries are used collectively to perform the classification and segmentation for the new image.

