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Related Concept Videos

Next-generation Sequencing03:00

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Studying Antibody Repertoires with Next-Generation Sequencing.

William D Lees1, Adrian J Shepherd2

  • 1Department of Biological Sciences and Institute of Structural and Molecular Biology, Birkbeck, University of London, Malet Street, London, WC1E 7HX, UK.

Methods in Molecular Biology (Clifton, N.J.)
|November 30, 2016
PubMed
Summary

Next-generation sequencing (NGS) reveals antibody repertoire details for studying infections, autoimmunity, and cancer. Challenges in NGS methods require careful experimental design for antibody repertoire analysis.

Keywords:
AntibodiesAntibodyomeNext generation sequencingRep-SeqRepertoire analysis

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Area of Science:

  • Immunology
  • Genomics
  • Bioinformatics

Background:

  • Next-generation sequencing (NGS) enables detailed study of antibody repertoires.
  • Antibody repertoire analysis is crucial for understanding immune responses in infection, autoimmunity, and cancer.

Purpose of the Study:

  • To outline contexts for antibody repertoire analysis.
  • To summarize available tools for repertoire studies.
  • To review methods and conclusions from vaccination studies.

Main Methods:

  • Utilizing next-generation sequencing (NGS) for high-throughput antibody repertoire analysis.
  • Addressing challenges posed by repertoire polymorphism in experimental design.
  • Reviewing established tools and methodologies for repertoire characterization.

Main Results:

  • NGS provides unprecedented detail on antibody repertoires.
  • Polymorphism in antibody repertoires presents unique analytical challenges.
  • Vaccination studies have significantly advanced repertoire analysis.

Conclusions:

  • Antibody repertoire analysis is a powerful tool for studying immune responses.
  • Careful consideration of NGS methods and experimental design is vital.
  • Further research in this area can yield insights into disease mechanisms and vaccine efficacy.