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Published on: October 30, 2016
Development of a Single Locus Sequence Typing (SLST) Scheme for Typing Bacterial Species Directly from Complex
Christian F P Scholz1, Anders Jensen2
1Department of Biomedicine, Aarhus University, Wilhelms Meyers Allé 4, 8000, Aarhus, Denmark. cs@biomed.au.dk.
Abstract:
The protocol describes a computational method to develop a Single Locus Sequence Typing (SLST) scheme for typing bacterial species. The resulting scheme can be used to type bacterial isolates as well as bacterial species directly from complex communities using next-generation sequencing technologies.
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