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Fixed Target Serial Data Collection at Diamond Light Source
Published on: February 26, 2021
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Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography
Kazuya Hasegawa1, Keitaro Yamashita2, Tomohiro Murai3
1Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo 679-5198, Japan.
Journal of Synchrotron Radiation
|December 24, 2016
Summary
Serial synchrotron rotation crystallography (SSX) enables efficient data collection for protein microcrystallography. Optimizing sample rotation steps improves data accuracy and anomalous signal for mercury single-wavelength anomalous diffraction (Hg-SAD) phasing.
Area of Science:
- Structural biology
- X-ray crystallography
Background:
- Serial crystallography, including serial femtosecond crystallography (SFX), shows promise for protein microcrystallography.
- Serial synchrotron crystallography (SSX) is explored as an alternative, but faces challenges with radiation damage due to longer exposure times.
Purpose of the Study:
- To evaluate the advantages of sample rotation in serial synchrotron crystallography (SSX).
- To investigate the influence of radiation dose on data quality and mercury single-wavelength anomalous diffraction (Hg-SAD) phasing.
- To determine optimal rotation parameters for collecting high-quality diffraction data and phasing using Hg-SAD.
Main Methods:
- Serial synchrotron rotation crystallography was employed.
- Mercury single-wavelength anomalous diffraction (Hg-SAD) phasing was performed on luciferin regenerating enzyme (LRE) microcrystals.
- The impact of varying rotation steps and radiation doses on data quality, resolution, and anomalous signal was analyzed.
Main Results:
- Sample rotation proved effective for accurate data collection in SSX.
- The optimal helical rotation step varied depending on factors like multiplicity, partiality, exposure time, and background scattering.
- For LRE microcrystals, a 0.25° rotation step maximized resolution, while steps ≥1° were better for Hg-SAD phasing.
- Increased resolution and anomalous signal were observed up to 3.4 MGy due to improved signal-to-noise, despite specific damage at the Hg site beyond 1.1 MGy.
Conclusions:
- Sample rotation is a crucial technique for enhancing data collection in serial synchrotron crystallography.
- Careful selection of rotation step and radiation dose is necessary to balance data quality, resolution, and phasing capabilities.
- SSX with Hg-SAD phasing offers a viable approach for determining protein structures from microcrystals.
Keywords:
mercury single-wavelength anomalous diffractionradiation damageserial synchrotron crystallographyMore Related Videos
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