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Updated: Mar 9, 2026

Using the E1A Minigene Tool to Study mRNA Splicing Changes
Published on: April 22, 2021
[Pre-mRNA splicing: when the spliceosome loses ground]
Gwendal Dujardin1, Élisabeth Daguenet1, Delphine G Bernard2
1Centre de Regulació Genòmica (CRG), the Barcelona Institute of Science and Technology, Barcelone, Espagne.
Abstract:
Pre-mRNA splicing is an obligatory step required to assemble the vast majority of mRNAs in eukaryotes. In humans, each gene gives rise to at least two transcripts, with an average 6-8 spliced transcripts per gene. Pre-mRNA splicing is not unequivocal. Variations may occur, such that splicing can become alternative, thereby participating in increasing protein variability and restricting the gap that exists between the relatively low number of genes - between 20,000 and 25,000 in humans - and the much higher number of distinct proteins - at least 100,000. In addition, although alternative pre-mRNA splicing often fulfils cell-specific needs, many aberrant splicing events can happen and lead to either hereditary or acquired diseases such as neurodegenerative diseases or cancers. In those cases, alternative splicing events may serve as disease-associated markers, or even as targets for corrective approaches. In this review, we will summarize the main aspects of regulated alternative splicing. We will present the spliceosome, a large ribonucleoprotein complex that orchestrates the splicing reactions and that was recently identified as a preferential target for mutations in several pathologies. We shall discuss some spliceosome-associated defects linked to either cis (i.e on the DNA) or trans (e.g. in proteins) alterations of splicing machinery, like those that have been reported in genetic or acquired diseases.
Insights
Alternative pre-mRNA splicing generates protein diversity but aberrant events cause diseases. This review covers regulated splicing, the spliceosome, and its defects in pathologies.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Pre-messenger RNA (pre-mRNA) splicing is essential for mRNA maturation in eukaryotes.
- Alternative splicing significantly expands protein diversity from a limited gene set.
- Aberrant splicing is linked to diseases like cancer and neurodegeneration.
Purpose of the Study:
- To review regulated alternative pre-mRNA splicing.
- To present the spliceosome's role and structure.
- To discuss spliceosome defects in disease.
Main Methods:
- Literature review of splicing mechanisms and spliceosome function.
- Analysis of spliceosome mutations in human diseases.
- Discussion of cis and trans alterations affecting splicing.
Main Results:
- Alternative splicing increases proteome complexity.
- The spliceosome is a key regulator of splicing.
- Spliceosome mutations are implicated in various pathologies.
Conclusions:
- Regulated alternative splicing is crucial for cellular function and protein diversity.
- Spliceosome dysfunction contributes to disease development.
- Understanding splicing defects offers therapeutic targets.
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