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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
p53 mediates the suppression of cancer cell invasion by inducing LIMA1/EPLIN
Tomoko Ohashi1, Masashi Idogawa2, Yasushi Sasaki2
1Department of Medical Genome Sciences, Research Institute for Frontier Medicine, Sapporo Medical University School of Medicine, Japan; Research Fellow of Japan Society for the Promotion of Science, Japan.
Abstract:
The tumor suppressor gene p53 is frequently mutated in human cancer. p53 executes various functions, such as apoptosis induction and cell cycle arrest, by modulating transcriptional regulation. In this study, LIM domain and Actin-binding protein 1 (LIMA1) was identified as a target of the p53 family using a cDNA microarray. We also evaluated genome-wide occupancy of the p53 protein by performing chromatin immunoprecipitation-sequencing (ChIP-seq) and identified two p53 response elements in the LIMA1 gene. LIMA1 protein levels were increased by treatment with nutlin-3a, a small molecule that activates endogenous p53. In addition, LIMA1 expression was significantly downregulated in cancers compared with normal tissues. Knockdown of LIMA1 significantly enhanced cancer cell invasion and partially inhibited p53-induced suppression of cell invasion. Furthermore, low expression of LIMA1 in cancer patients correlated with decreased survival and poor prognosis. Thus, p53-induced LIMA1 inhibits cell invasion, and the downregulation of LIMA1 caused by p53 mutation results in decreased survival in cancer patients. Collectively, this study reveals the molecular mechanism of LIMA1 downregulation in various cancers and suggests that LIMA1 may be a novel prognostic predictor and a therapeutic target for cancer.
Insights
The tumor suppressor p53 (p53) regulates LIM domain and Actin-binding protein 1 (LIMA1). p53-induced LIMA1 inhibits cancer cell invasion, and its downregulation correlates with poor patient survival.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- The tumor suppressor gene p53 plays a critical role in cancer by regulating cellular processes like apoptosis and cell cycle arrest.
- p53 exerts its functions primarily through transcriptional regulation, controlling the expression of numerous target genes.
Purpose of the Study:
- To identify novel p53 target genes involved in cancer progression.
- To elucidate the functional role of LIM domain and Actin-binding protein 1 (LIMA1) in cancer, particularly in relation to p53.
- To investigate the potential of LIMA1 as a prognostic biomarker and therapeutic target in cancer.
Main Methods:
- cDNA microarray analysis to identify p53-regulated genes.
- Chromatin immunoprecipitation-sequencing (ChIP-seq) to determine p53 binding sites genome-wide.
- Nutlin-3a treatment to activate endogenous p53 and assess LIMA1 expression.
- LIMA1 knockdown experiments to evaluate its effect on cancer cell invasion.
- Correlation analysis between LIMA1 expression and patient survival data.
Main Results:
- LIMA1 was identified as a direct transcriptional target of the p53 family, with two p53 response elements found in the LIMA1 gene.
- Activation of p53 by nutlin-3a led to increased LIMA1 protein levels.
- LIMA1 expression was significantly downregulated in various cancer tissues compared to normal tissues.
- Knockdown of LIMA1 enhanced cancer cell invasion and partially reversed p53-mediated suppression of invasion.
- Low LIMA1 expression in cancer patients was associated with decreased survival and poor prognosis.
Conclusions:
- p53-induced LIMA1 functions as an inhibitor of cancer cell invasion.
- Downregulation of LIMA1, often due to p53 mutations, contributes to decreased survival in cancer patients.
- LIMA1 represents a potential novel prognostic predictor and therapeutic target for cancer treatment.
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