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Automatic MRI segmentation of para-pharyngeal fat pads using interactive visual feature space analysis for
Muhammad Laiq Ur Rahman Shahid1, Teodora Chitiboi2,3, Tetyana Ivanovska4
1Jacobs University, Bremen, Germany. m.shahid@jacobs-university.de.
BMC Medical Imaging
|February 16, 2017
Summary
We developed an automatic method to segment parapharyngeal fat pads from MRI scans, crucial for understanding obstructive sleep apnea (OSA) causes and developing interventions.
Area of Science:
- Medical Imaging
- Sleep Medicine
- Anatomy
Background:
- Obstructive sleep apnea (OSA) is a significant public health concern.
- Understanding the pathogenesis of OSA requires detailed analysis of parapharyngeal fat pads.
- Identifying anatomical risk factors for OSA necessitates reliable segmentation techniques for these fat pads.
Purpose of the Study:
- To develop a context-based automatic segmentation algorithm for parapharyngeal fat pads.
- To delineate fat pads from magnetic resonance images (MRIs) in a population-based study.
- To enable automated segregation of fat pads from other anatomical structures.
Main Methods:
- A segmentation pipeline integrating texture analysis, connected component analysis, and object-based image analysis.
- Supervised classification employing an interactive visual analysis tool for automated segregation.
- Development of a fully automatic segmentation technique requiring no user interaction.
Main Results:
- The developed algorithm automatically extracts parapharyngeal fat pads efficiently.
- The method is suitable for large-scale population-based epidemiological studies.
- Quantitative evaluation yielded an average 78% detected volume fraction and 79% Dice coefficient, comparable to inter-observer variability.
Conclusions:
- The automatic segmentation method provides accurate results for parapharyngeal fat pads.
- This technique holds potential for large-scale studies investigating OSA pathogenesis.
- The findings contribute to understanding anatomical risk factors in OSA syndrome.
Keywords:
Interactive visual analysis toolMagnetic resonance imaging (MRI)Obstructive sleep apnea (OSA)Para-pharyngeal fat pads segmentationUpper airway segmentation
