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Comparative Lesions Analysis Through a Targeted Sequencing Approach
Published on: November 5, 2019
Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer
Yoshifumi Shimada1, Ryoma Yagi1, Hitoshi Kameyama1
1Division of Digestive and General Surgery, Niigata University Graduate School of Medical and Dental Sciences, Niigata 951-8510, Japan.
Abstract:
HER2-targeted therapy is considered effective for KRAS codon 12/13 wild-type, HER2-positive metastatic colorectal cancer (CRC). In general, HER2 status is determined by the use of immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). Comprehensive genomic sequencing (CGS) enables the detection of gene mutations and copy number alterations including KRAS mutation and HER2 amplification; however, little is known about the utility of CGS for detecting HER2-positive CRC. To assess its utility, we retrospectively investigated 201 patients with stage I-IV CRC. The HER2 status of the primary site was assessed using IHC and FISH, and HER2 amplification of the primary site was also assessed using CGS, and the findings of these approaches were compared in each patient. CGS successfully detected alterations in 415 genes including KRAS codon 12/13 mutation and HER2 amplification. Fifty-nine (29%) patients had a KRAS codon 12/13 mutation. Ten (5%) patients were diagnosed as HER2 positive because of HER2 IHC 3+, and the same 10 (5%) patients had HER2 amplification evaluated using CGS. The results of HER2 status and HER2 amplification were completely identical in all 201 patients (P < .001). Nine of the 10 HER2-positive patients were KRAS 12/13 wild-type and were considered possible candidates for HER2-targeted therapy. CGS has the same utility as IHC and FISH for detecting HER2-positive patients who are candidates for HER2-targeted therapy, and facilitates precision medicine and tailor-made treatment.
Insights
Comprehensive genomic sequencing (CGS) accurately identifies HER2-positive colorectal cancer (CRC) patients eligible for targeted therapy, matching traditional methods like IHC and FISH. This supports precision medicine for CRC treatment.
Area of Science:
- Oncology
- Genomics
- Molecular Diagnostics
Background:
- HER2-targeted therapy is crucial for KRAS wild-type, HER2-positive metastatic colorectal cancer (CRC).
- Traditional HER2 detection uses immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH).
- The utility of comprehensive genomic sequencing (CGS) for HER2-positive CRC detection remains under-explored.
Purpose of the Study:
- To evaluate the utility of CGS in detecting HER2-positive CRC.
- To compare CGS findings with IHC and FISH for HER2 status and amplification.
- To assess CGS's role in identifying candidates for HER2-targeted therapy.
Main Methods:
- Retrospective analysis of 201 stage I-IV CRC patients.
- HER2 status assessed by IHC and FISH.
- HER2 amplification and KRAS mutations evaluated using CGS, analyzing 415 genes.
Main Results:
- CGS detected KRAS codon 12/13 mutations in 29% of patients.
- Ten patients (5%) were HER2-positive by IHC 3+ and CGS-detected HER2 amplification.
- CGS and IHC/FISH showed identical results for HER2 status and amplification (P < .001).
Conclusions:
- CGS demonstrates equivalent utility to IHC and FISH for identifying HER2-positive CRC patients.
- Nine of ten HER2-positive patients were KRAS wild-type, qualifying for HER2-targeted therapy.
- CGS facilitates precision medicine by enabling tailor-made treatment strategies for CRC.

