First complete genome sequence of a virulent bacteriophage infecting the opportunistic pathogen Serratia rubidaea

Shaozhen Xing1, Taping Ma2,3, Xianglilan Zhang1

  • 1State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, People's Republic of China.

Archives of Virology
|March 8, 2017
PubMed

Insights

Researchers isolated a Serratia rubidaea phage, vB_Sru IME250, from hospital sewage. Genomic analysis revealed its classification within the Myoviridae family, with potential applications in phage therapy.

Area of Science:

  • Microbiology
  • Virology
  • Genomics

Background:

  • Bacteriophages are viruses that infect bacteria and are increasingly explored for therapeutic applications.
  • The emergence of antibiotic-resistant bacteria necessitates the discovery of novel antimicrobial agents, including bacteriophages.
  • Hospital sewage can serve as a reservoir for diverse bacterial and viral communities.

Purpose of the Study:

  • To isolate and characterize a novel bacteriophage infecting Serratia rubidaea.
  • To determine the genomic features and taxonomic classification of the isolated phage.
  • To assess the potential of the phage for further research and application.

Main Methods:

  • Isolation of bacteriophage from hospital sewage.
  • Morphological characterization using electron microscopy.
  • High-throughput sequencing for whole-genome analysis.
  • Bioinformatic analysis to identify coding sequences and assess genomic similarity.

Main Results:

  • Isolation of a novel Serratia rubidaea phage, designated vB_Sru IME250.
  • Morphological analysis suggested classification within the Myoviridae family.
  • The phage genome is linear, double-stranded DNA (154,938 bp) with 193 predicted coding sequences.
  • Genomic analysis revealed 40.04% GC content and 84% similarity to Klebsiella phage 0507-KN2-1.

Conclusions:

  • vB_Sru IME250 is a novel Myoviridae family phage with a distinct genomic profile.
  • The characterized phage represents a potential candidate for further investigation in phage therapy against Serratia rubidaea infections.
  • Genomic data provides a foundation for understanding phage-host interactions and developing phage-based interventions.

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