Related Experiment Video
Updated: Aug 15, 2026

Aseptic Laboratory Techniques: Plating Methods
Published on: May 11, 2012
Physical comparison of parathion hydrolase plasmids from Pseudomonas diminuta and Flavobacterium sp
W W Mulbry1, P C Kearney, J O Nelson
1Pesticide Degradation Laboratory, U.S. Department of Agriculture, Beltsville, Maryland 20705.
Abstract:
Restriction maps of two plasmids encoding parathion hydrolase have been determined. pPDL2 is a 39-kb plasmid harbored by Flavobacterium sp. (ATCC 27551), while pCMS1 is a 70-kb plasmid found in Pseudomonas diminuta (strain MG). Both plasmids previously have been shown to share homologous parathion hydrolase genes (termed opd for organophosphate degradation) as judged by DNA-DNA hybridization and restriction mapping. In the present study, we conducted DNA hybridization experiments using each of nine PstI restriction fragments from pCMS1 as probes against Flavobacterium plasmid DNA. The opd genes of both plasmids are located within a highly conserved region of approximately 5.1 kb. This region of homology extends approximately 2.6 kb upstream and 1.7 kb downstream from the opd genes. No homology between the two plasmids is evident outside of this region.
Insights
Two bacterial plasmids, pPDL2 and pCMS1, share homologous organophosphate degradation (opd) genes within a conserved 5.1 kb region. This finding highlights genetic similarity in pesticide-degrading enzymes between Flavobacterium and Pseudomonas species.
Area of Science:
- Molecular Biology
- Environmental Microbiology
- Biochemistry
Background:
- Parathion hydrolase enzymes are crucial for the degradation of organophosphate pesticides.
- Two plasmids, pPDL2 (Flavobacterium sp.) and pCMS1 (Pseudomonas diminuta), encode homologous parathion hydrolase genes (opd).
- Previous studies confirmed gene homology via DNA-DNA hybridization and restriction mapping.
Purpose of the Study:
- To precisely delineate the region of homology encoding parathion hydrolase genes between pPDL2 and pCMS1.
- To investigate the extent of conserved DNA sequences surrounding the opd genes on both plasmids.
Main Methods:
- Restriction mapping of pPDL2 (39-kb) and pCMS1 (70-kb) plasmids.
- DNA hybridization experiments using PstI restriction fragments of pCMS1 as probes against Flavobacterium plasmid DNA.
- Comparative analysis of restriction patterns to identify homologous regions.
Main Results:
- The parathion hydrolase (opd) genes reside within a highly conserved region of approximately 5.1 kb on both plasmids.
- This conserved region encompasses approximately 2.6 kb upstream and 1.7 kb downstream of the opd genes.
- No significant DNA homology was detected between the two plasmids outside this specific 5.1 kb region.
Conclusions:
- The parathion hydrolase genes (opd) are located in a conserved genetic locus shared by Flavobacterium and Pseudomonas.
- This conserved region likely plays a critical role in the maintenance and expression of the organophosphate degradation genes.
- The findings provide a detailed understanding of the genetic basis for parathion hydrolase in these bacterial species.
Related Concept Videos
Plasmids
Bacterial Phylum Tenericutes
DNA Bacteriophages

