Pulmonary Sarcomatoid Carcinomas Commonly Harbor Either Potentially Targetable Genomic Alterations or High Tumor

Alexa B Schrock1, Shuyu D Li2, Garrett M Frampton1

  • 1Foundation Medicine, Inc., Cambridge, Massachusetts.

Abstract

Insights

Pulmonary sarcomatoid carcinoma (PSC) is a rare NSCLC with poor prognosis. Comprehensive genomic profiling reveals actionable targets and high tumor mutational burden, offering new treatment avenues.

Area of Science:

  • Oncology
  • Genomics
  • Pulmonary Medicine

Background:

  • Pulmonary sarcomatoid carcinoma (PSC) is an aggressive non-small cell lung cancer (NSCLC) subtype.
  • PSC is associated with poor prognosis and resistance to conventional chemotherapy.
  • Limited molecular characterization has hindered the development of targeted therapies for PSC.

Purpose of the Study:

  • To comprehensively characterize the genomic landscape of PSC.
  • To identify potentially targetable genomic alterations (GAs) and assess tumor mutational burden (TMB) in PSC.
  • To explore the utility of comprehensive genomic profiling (CGP) in guiding treatment decisions for PSC patients.

Main Methods:

  • Hybrid capture-based CGP was performed on 15,867 NSCLC cases, including 125 PSCs.
  • Tumor mutational burden (TMB) was calculated from sequenced DNA.
  • Genomic alterations were analyzed in key NSCLC-related genes.

Main Results:

  • TP53 GAs were found in 74% of PSC cases.
  • KRAS, MET, EGFR, BRAF, HER2, and RET alterations were identified in 62% of PSCs.
  • MET exon 14 alterations were significantly enriched in PSC (12%) compared to non-PSC NSCLC (3%).
  • A higher fraction of PSC cases exhibited high TMB (>20 mutations/Mb) compared to non-PSC NSCLC (20% vs. 14%).
  • Among nine patients treated with targeted or immunotherapies, six showed clinical benefit (partial response or stable disease).

Conclusions:

  • Most PSC cases harbor potentially targetable GAs or intermediate/high TMB.
  • CGP can identify actionable targets in PSC, a historically challenging disease.
  • Genomic profiling may offer crucial treatment options for PSC patients.

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