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Sparse and Specific Coding during Information Transmission between Co-cultured Dentate Gyrus and CA3 Hippocampal
Daniele Poli1, Srikanth Thiagarajan1, Thomas B DeMarse2
1Department of Biomedical Engineering, University of California Irvine, CA, USA.
Frontiers in Neural Circuits
|March 22, 2017
Summary
This study engineered a hippocampal network model to show that information flows more accurately from the dentate gyrus (DG) to CA3, revealing sparse neural coding critical for stimulus decoding.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Cellular Neuroscience
Background:
- The hippocampus plays a crucial role in memory formation and spatial navigation.
- Understanding information processing in hippocampal sub-regions like the dentate gyrus (DG) and CA3 is key to deciphering neural computation.
- Engineered neural networks offer a platform to study specific circuit dynamics and information flow.
Purpose of the Study:
- To investigate the encoding and decoding of stimulus information in a co-cultured DG-CA3 hippocampal network model.
- To test the hypothesis that feed-forward DG to CA3 information flow is more accurate than reverse CA3 to DG flow.
- To characterize the neural code, including sparseness and uniqueness, within these hippocampal sub-regions.
Main Methods:
- Co-culturing rat primary DG and CA3 neurons in a two-chamber device with micro-tunnel axonal connectivity.
- Utilizing a micro-electrode array (MEA) for stimulation and recording across an 8x8 grid.
- Applying paired-pulse stimulation and employing Support Vector Machine (SVM) learning algorithms for decoding stimulus site information.
Main Results:
- Stimulation in DG evoked sparse and specific responses in CA3, indicating a selective neural code.
- CA3-DG networks exhibited less sparse coding compared to DG-DG and CA3-CA3 control networks.
- Decoding accuracy of stimulation sites in DG from CA3 recordings was 43%, significantly higher than the reverse (DG from CA3).
Conclusions:
- The engineered DG-CA3 co-culture model successfully recapitulates aspects of the in vivo hippocampal network.
- Sparse and specific neural responses in CA3 are selectively evoked by DG stimulation.
- Information decoding is more accurate in the feed-forward DG to CA3 direction, supporting its role in hippocampal information processing.

