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Related Experiment Videos

Designed Spiroketal Protein Modulation.

Marcel Scheepstra1, Sebastian A Andrei1, M Yagiz Unver2

  • 1Laboratory of Chemical Biology and Institute for Complex Molecular Systems (ICMS), Department of Biomedical Engineering, Technische Universiteit Eindhoven, Den Dolech 2, 5612 AZ, Eindhoven, The Netherlands.

Angewandte Chemie (International Ed. in English)
|April 14, 2017
PubMed
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Researchers designed a novel bisbenzannulated spiroketal that binds strongly to the retinoid X receptor (RXR). This spiroketal shows potential for structure-based drug discovery targeting nuclear receptors.

Area of Science:

  • Medicinal Chemistry
  • Structural Biology
  • Drug Discovery

Background:

  • Spiroketals are prevalent structural motifs in biologically active natural products.
  • Their synthesis is well-studied, yet their application in structure-based drug discovery, particularly bisbenzannulated spiroketals, remains undemonstrated.
  • Retinoid X Receptor (RXR) is a key target in various therapeutic areas.

Purpose of the Study:

  • To rationally design a bisbenzannulated spiroketal with potent binding affinity for RXR.
  • To investigate the mechanism of action and structural basis for the spiroketal's interaction with RXR.
  • To explore the potential of designed spiroketals in targeting nuclear receptor subtypes.

Main Methods:

  • Rational design of a bisbenzannulated spiroketal compound.
Keywords:
drug designdrug discoverynatural productsspiro compoundsstructure elucidation

Related Experiment Videos

  • Biochemical assays to determine binding affinity to retinoid X receptor (RXR).
  • X-ray crystallography to solve the ternary complex structure of spiroketal-hRXRα-TIF2.
  • Main Results:

    • A novel bisbenzannulated spiroketal was successfully designed and synthesized.
    • The designed spiroketal demonstrated potent binding to RXR and induced partial co-activator recruitment.
    • The crystal structure revealed a canonical allosteric mechanism underlying the partial agonism.

    Conclusions:

    • Designed spiroketals, including bisbenzannulated variants, can effectively target nuclear receptors like RXR.
    • The first co-crystal structure of a designed spiroketal-protein complex provides insights into spiroketal-mediated allosteric modulation.
    • This study validates spiroketals as a promising scaffold for structure-based drug discovery against nuclear receptor targets.