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Updated: Mar 4, 2026

Dual DNA Rulers to Study the Mechanism of Ribosome Translocation with Single-Nucleotide Resolution
Published on: July 8, 2019
Visualizing multistep elevator-like transitions of a nucleoside transporter.
Marscha Hirschi1, Zachary Lee Johnson1, Seok-Yong Lee1
1Department of Biochemistry, Duke University Medical Center, 303 Research Drive, Durham, North Carolina 27710, USA.
Researchers visualized the intermediate steps of the elevator mechanism in nucleoside transporters. This reveals the detailed conformational path of membrane transport, offering new insights into transporter function.
Area of Science:
- Biochemistry
- Structural Biology
- Membrane Transport
Background:
- Membrane transporters facilitate substrate movement across cellular membranes via alternating access.
- The elevator mechanism is an emerging model where a transport domain moves across the membrane.
- Previous studies lacked detailed structural information on the conformational transitions within this mechanism.
Purpose of the Study:
- To elucidate the conformational pathway of the elevator mechanism in membrane transport.
- To characterize the intermediate states of a concentrative nucleoside transporter.
Main Methods:
- X-ray crystallography was employed to determine the structures of the transporter.
- Structures of inward-facing, intermediate, and outward-facing states were resolved.
- Multiple intermediate conformations were analyzed.
Main Results:
- Crystal structures captured the transport domain at various stages of its elevator motion.
- Multiple intermediate conformations revealed a detailed trajectory of the conformational transition.
- State-dependent conformational changes within the transport domain were identified.
Conclusions:
- The study presents a comprehensive trajectory of the elevator mechanism, moving beyond static end states.
- Detailed structural insights into intermediate conformations advance the understanding of membrane transporter dynamics.
- Findings provide a mechanistic basis for the elevator-like motion in nucleoside transporters.
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