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The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
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Shaping development by stochasticity and dynamics in gene regulation.

Peng Dong1, Zhe Liu2

  • 1Howard Hughes Medical Institute, Janelia Research Campus, 19700 Helix Dr, Ashburn, VA 20147, USA dongp@janelia.hhmi.org.

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|May 5, 2017
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Summary

Animal development involves gene expression, balancing single-cell randomness with coordinated embryonic patterns. Understanding this interplay is key to deciphering cell fate and body plan formation.

Keywords:
burstingdevelopmentgene expression noisegene regulationgene regulatory networkimaging

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Area of Science:

  • Developmental Biology
  • Systems Biology
  • Genetics

Background:

  • Animal development relies on precise spatio-temporal gene expression for cell differentiation and organismal morphology.
  • Two key gene regulation mechanisms exist: stochasticity in single cells and coordinated dynamics in embryos.

Purpose of the Study:

  • To discuss the origins and interplay of stochastic and coordinated gene regulation in animal development.
  • To review technological advancements for analyzing gene regulation at single-cell, single-molecule resolution.
  • To outline future experiments for bridging molecular dynamics and robust embryonic gene regulation.

Main Methods:

  • Review of existing literature on gene regulation in developmental biology.
  • Discussion of molecular and systems-level mechanisms of gene expression control.
  • Analysis of recent technological advancements in quantitative gene expression analysis.

Main Results:

  • Gene regulation in development involves a balance between randomness at the molecular level and coordinated patterns at the systems level.
  • This balance is crucial for determining cell fate and establishing the complex body plan.
  • New technologies enable unprecedented resolution in studying gene regulation dynamics.

Conclusions:

  • The interplay between stochastic and coordinated gene expression is fundamental to animal development.
  • Advanced quantitative methods are essential for understanding these complex regulatory processes.
  • Future research should focus on integrating single-cell dynamics with whole-embryo regulation principles.