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Reverse Yeast Two-hybrid System to Identify Mammalian Nuclear Receptor Residues that Interact with Ligands and/or Antagonists
Published on: November 15, 2013
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A New Method, "Reverse Yeast Two-Hybrid Array" (RYTHA), Identifies Mutants that Dissociate the Physical Interaction
Ifat Lev1, Keren Shemesh2, Marina Volpe1
1Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 52900, Israel.
Genetics
|May 7, 2017
Summary
We developed a new method, Reverse Yeast Two-Hybrid Array (RYTHA), to find proteins that change how other proteins interact. RYTHA successfully identified factors modulating the Elg1-Slx5 protein interaction, linking DNA replication, repair, and degradation pathways.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Cellular processes rely on protein interactions.
- The Yeast Two-Hybrid (Y2H) method detects physical protein-protein interactions.
- Understanding modulators of these interactions is crucial for deciphering cellular pathways.
Purpose of the Study:
- To introduce a novel systematic genetic methodology, Reverse Yeast Two-Hybrid Array (RYTHA).
- To identify proteins that modulate specific protein-protein interactions.
- To apply RYTHA to uncover factors influencing the Elg1-Slx5 protein interaction.
Main Methods:
- Development of RYTHA, integrating Y2H with synthetic genetic array technology.
- Systematic screening of Saccharomyces cerevisiae mutant libraries.
- Assaying disruption of the Elg1 N-terminus and Slx5 protein interaction.
Main Results:
- RYTHA successfully identified mutations disrupting the Elg1-Slx5 interaction.
- The interaction requires SUMO-targeted ubiquitin ligase (STUbL) activity and Elg1's PCNA unloading.
- Topoisomerase I DNA-protein cross-links were identified as key in separating these activities.
Conclusions:
- RYTHA is an effective tool for identifying interaction modulators.
- The Elg1-Slx5 interaction is linked to DNA replication, repair, and proteasomal degradation.
- Topoisomerase-mediated cross-links play a role in regulating these pathways.

