Related Experiment Video
Updated: Mar 2, 2026

04:37
High-Pressure NMR Experiments for Detecting Protein Low-Lying Conformational States
Published on: June 29, 2021
3.2K
Low crowding agent concentration destabilizes against pressure unfolding.
J Somkuti1, Z Török2, F Pfalzgraf2
1Hungarian Academy of Sciences-Semmelweis University, Molecular Biophysics Research Group, Budapest, Hungary.
Biophysical Chemistry
|May 16, 2017
Summary
Macromolecular crowding affects enzyme behavior within cells. Low concentrations of crowding agents surprisingly decrease protein pressure stability by altering hydration volume.
Area of Science:
- Biochemistry
- Cell Biology
- Biophysics
Background:
- High intracellular macromolecule concentrations, known as macromolecular crowding, significantly influence enzyme activity and biological processes.
- The excluded volume effect is a primary consequence of macromolecular crowding, impacting molecular interactions and stability.
- Understanding these effects is crucial for comprehending cellular function and protein behavior in vivo.
Purpose of the Study:
- To investigate the impact of macromolecular crowding on protein stability under varying pressure conditions.
- To analyze the role of excluded volume and hydration changes in protein stability within crowded cellular environments.
- To quantify the pressure and temperature stability of specific proteins (bovine serum albumin and lysozyme) in the presence of different crowding agents.
Main Methods:
- Performed pressure-volume experiments to assess protein stability.
- Utilized various crowding agents including dextran, Ficoll™, and lysozyme at different concentrations.
- Measured temperature and pressure stability of bovine serum albumin and lysozyme.
Main Results:
- A key finding is that low concentrations of all tested crowding agents reduced protein pressure stability.
- This decrease in stability is attributed to a reduced hydration volume change in the crowded environment.
- The study highlights the complex relationship between excluded volume, partial protein volume, and influenced volume.
Conclusions:
- Macromolecular crowding has a non-intuitive effect on protein pressure stability, particularly at low crowding agent concentrations.
- Hydration dynamics play a critical role in mediating the effects of excluded volume on protein stability.
- The findings provide insights into the volumetric parameters governing protein behavior in crowded biological systems.
Related Concept Videos
Molecular Chaperones and Protein Folding
20.5K
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
20.5K
Molecular Chaperones and Protein Folding
15.2K
15.2K
Destabilization of Microtubules
3.8K
The destabilization of microtubules can occur during different stages of the microtubule lifecycle, such as nucleation or elongation. It can take place at either end of the microtubule or in the microtubule lattices as a whole. The lifespan of individual microtubules within a cell varies according to the cell type and stage of the cell cycle. During interphase, the lifespan of the microtubule is about 30 minutes, while during cell division, it is about 15 minutes. In axonal microtubules of...
3.8K
Protein Folding
11.9K
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
11.9K
Protein Folding
129.0K
Overview
129.0K
Cooperative Allosteric Transitions
9.1K
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
9.1K

