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Development of Multiwell-Plate Methods Using Pure Cultures of Methanogens To Identify New Inhibitors for Suppressing

M R Weimar1, J Cheung1, D Dey2

  • 1Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand.

Applied and Environmental Microbiology
|May 21, 2017
PubMed
Summary
This summary is machine-generated.

Researchers developed a high-throughput 96-well plate method for growing methanogens, enabling faster screening of compounds to find inhibitors for reducing ruminant methane emissions.

Keywords:
MethanobrevibacterMethanococcus maripaludisgreenhouse gashigh-throughputmethanogenrumen

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Area of Science:

  • Microbiology
  • Environmental Science
  • Biotechnology

Background:

  • Hydrogenotrophic methanogens are crucial in ruminant digestion but require difficult, low-throughput anaerobic culturing.
  • Methane emissions from ruminants significantly contribute to global greenhouse gas emissions, necessitating novel mitigation strategies.
  • Current methods for identifying methanogen inhibitors are hindered by the lack of high-throughput growth assays.

Purpose of the Study:

  • To develop and optimize a high-throughput 96-well microtiter plate assay for culturing methanogens.
  • To validate the assay's robustness, reproducibility, and sensitivity for screening chemical libraries.
  • To identify novel methanogen-specific inhibitors for mitigating ruminant methane emissions.

Main Methods:

  • Optimized key parameters including inoculum size, reducing agents, assay duration, solvent compatibility, and culture volume for 96-well plates.
  • Validated the assay using known methanogen inhibitors and statistical analysis.
  • Screened Sigma-Aldrich LOPAC and an in-house natural product library against *Methanococcus maripaludis*.

Main Results:

  • Successfully developed and optimized a high-throughput 96-well microtiter plate method for growing marine and rumen methanogens.
  • Validated the assay's sensitivity and reproducibility, identifying bioactive compounds from compound libraries.
  • Confirmed minimum inhibitory concentration (MIC) values for identified inhibitors against *M. maripaludis* and *Methanobrevibacter* species AbM4.

Conclusions:

  • The developed high-throughput assay significantly increases the capacity for screening compound libraries against methanogens.
  • This platform facilitates the discovery of novel methanogen inhibitors, crucial for developing agritech solutions to reduce ruminant methane emissions.
  • The method provides a powerful tool for accelerating research into controlling greenhouse gas emissions from livestock agriculture.