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Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Aberrant Methylation-Mediated Silencing of lncRNA MEG3 Functions as a ceRNA in Esophageal Cancer
Zhiming Dong1, Aili Zhang2, Shengnan Liu1
1Laboratory of Pathology, Hebei Cancer Institute, the Fourth Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Abstract:
Maternally expressed gene 3 (MEG3), a long non-coding RNA (lncRNA), has tumor-suppressor properties and its expression is lost in several human tumors. However, its biological role in esophageal squamous cell carcinoma (ESCC) tumorigenesis is poorly defined. The present study determined the role and methylation status of MEG3 in esophageal cancer cells and ESCC clinical specimens, and further observed the competing endogenous RNA (ceRNA) activity of MEG3 in the pathogenesis and development of ESCC. Significant downregulation of MEG3 was detected in esophageal cancer cells and ESCC tissues and the expression level of MEG3 was significantly increased in cancer cells after treated with the DNA methyltransferase inhibitor 5-Aza-dC. Upregulation of MEG3 led to the inhibition of proliferation and invasiveness of the cancer cells. The aberrant promoter hypermethylation of MEG3 indicates silencing of its expression. Furthermore, MEG3 acts as a ceRNA to regulate the expression of E-cadherin and FOXO1 by binding hsa-miR-9. Upregulation of miR-9 was detected in esophageal cancer cell lines and ESCC tissues, and miR-9 promoted esophageal cancer cell proliferation and invasion. Finally, downregulation and hypermethylation of MEG3 was associated with ESCC patients' survival.Implications: MEG3 functions as a tumor-suppressive lncRNA and aberrant promoter hypermethylation is critical for MEG3 gene silencing in ESCC. In addition, MEG3 acts as a ceRNA to regulate expression of E-cadherin and FOXO1 by competitively binding miR-9 and may be used as a potential biomarker in predicting ESCC patients' progression and prognosis. Mol Cancer Res; 15(7); 800-10. ©2017 AACR.
Insights
Maternally expressed gene 3 (MEG3), a tumor-suppressive long non-coding RNA, is downregulated and hypermethylated in esophageal squamous cell carcinoma (ESCC). Restoring MEG3 inhibits cancer cell growth and invasion, suggesting its potential as a prognostic biomarker.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Maternally expressed gene 3 (MEG3), a long non-coding RNA (lncRNA), exhibits tumor-suppressive functions but its role in esophageal squamous cell carcinoma (ESCC) is unclear.
- Loss of MEG3 expression is observed in various human cancers, necessitating investigation into its specific involvement in ESCC pathogenesis.
Purpose of the Study:
- To elucidate the role and methylation status of MEG3 in esophageal cancer cells and clinical ESCC specimens.
- To investigate the competing endogenous RNA (ceRNA) activity of MEG3 in ESCC development.
- To assess the potential of MEG3 as a biomarker for ESCC patient prognosis.
Main Methods:
- Quantitative analysis of MEG3 expression in esophageal cancer cells and ESCC tissues.
- Treatment of cancer cells with 5-aza-dC (a DNA methyltransferase inhibitor) to assess MEG3 expression changes.
- Functional assays to evaluate the impact of MEG3 upregulation on cancer cell proliferation and invasion.
- Analysis of MEG3 promoter methylation status.
- Investigation of MEG3's ceRNA activity by examining its interaction with hsa-miR-9 and downstream targets (E-cadherin, FOXO1).
- Correlation analysis between MEG3 expression/methylation and ESCC patient survival.
Main Results:
- MEG3 was significantly downregulated in esophageal cancer cells and ESCC tissues.
- MEG3 expression increased after treatment with 5-aza-dC, indicating promoter hypermethylation contributes to its silencing.
- Upregulation of MEG3 suppressed cancer cell proliferation and invasion.
- MEG3 functions as a ceRNA, regulating E-cadherin and FOXO1 by sponging hsa-miR-9, which was upregulated in ESCC.
- Downregulation and hypermethylation of MEG3 correlated with poorer survival in ESCC patients.
Conclusions:
- MEG3 acts as a tumor-suppressive lncRNA in ESCC, with aberrant promoter hypermethylation leading to its silencing.
- MEG3's ceRNA activity, involving the miR-9/E-cadherin/FOXO1 axis, plays a role in ESCC pathogenesis.
- MEG3 holds potential as a predictive biomarker for ESCC progression and patient prognosis.
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