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Related Experiment Video

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Falcon: a highly flexible open-source software for closed-loop neuroscience.

Davide Ciliberti1, Fabian Kloosterman

  • 1Neuro-Electronic Research Flanders (NERF), Leuven, Belgium. Brain & Cognition Research Unit, KU Leuven, Belgium. VIB, Leuven, Belgium.

Journal of Neural Engineering
|May 27, 2017
PubMed
Summary
This summary is machine-generated.

We developed Falcon, an open-source software for real-time neuroscience experiments. This platform offers sub-millisecond latency for high-performance brain dynamics analysis, enabling advanced closed-loop research.

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Area of Science:

  • Neuroscience
  • Computational Neuroscience
  • Software Engineering

Background:

  • Closed-loop experiments are crucial for understanding brain dynamics.
  • Existing software platforms may lack the performance required for complex real-time data processing.

Purpose of the Study:

  • To create an open-source software platform, Falcon, for high-performance real-time processing of streaming experimental data.
  • To facilitate a wide range of closed-loop neuroscience experiments.

Main Methods:

  • Developed Falcon, a C++ multi-threaded software enabling arbitrary processing graph execution.
  • Nodes communicate via thread-safe buffers, allowing easy implementation of new processing nodes and data types.
  • Tested Falcon on workstations with varying core counts, using Neuralynx and Open Ephys hardware for data acquisition and digital output modules for closed-loop control.

Main Results:

  • Falcon achieved sub-millisecond intrinsic latency on Neuralynx hardware (<1 ms) and low latency (<15 ms) on Open Ephys hardware.
  • Software latency contribution was below 0.5 ms, consistent across different workstation core counts.
  • Successfully deployed Falcon for real-time detection of hippocampal population bursts with an average latency of ~40 ms.

Conclusions:

  • Falcon is a novel, open-source software for closed-loop neuroscience with sub-millisecond latency.
  • It provides experimenters direct control over CPU resources for computationally intensive tasks.
  • Falcon is poised to be a valuable tool for advanced neuroscience research, including real-time neural decoding and encoding.