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Updated: Feb 28, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Current pathogenic Escherichia coli foodborne outbreak cases and therapy development
Shih-Chun Yang1, Chih-Hung Lin2, Ibrahim A Aljuffali3
1Pharmaceutics Laboratory, Graduate Institute of Natural Products, Chang Gung University, 259 Wen-Hwa 1st Road, Kweishan, Taoyuan, 333, Taiwan.
Foodborne pathogenic Escherichia coli (E. coli) causes widespread illness and economic loss. This review details E. coli pathotypes, outbreaks, and prevention strategies to combat contamination from farm to table.
Area of Science:
- Food safety and public health
- Microbiology
- Epidemiology
Background:
- Food contamination by pathogenic microorganisms, particularly E. coli, poses significant global public health and economic challenges.
- E. coli contamination can occur at any stage of the food supply chain, originating from environmental, animal, or human sources.
- Specific strains like E. coli O157 and O104 are common causes of foodborne illness, even in developed nations.
Purpose of the Study:
- To review and analyze global foodborne E. coli contamination cases over the past decade.
- To elucidate the infection mechanisms and symptoms of major diarrheagenic E. coli pathotypes.
- To discuss current advancements in controlling and preventing bacterial food contamination.
Main Methods:
- Systematic review of worldwide reports on foodborne E. coli contamination cases from the last 10 years.
- Categorization and description of five key diarrheagenic E. coli pathotypes: enteropathogenic E. coli (EPEC), Shiga toxin-producing E. coli/enterohemorrhagic E. coli (STEC/EHEC), Shigella/enteroinvasive E. coli (EIEC), enteroaggregative E. coli (EAEC), and enterotoxigenic E. coli (ETEC).
- Analysis of foodborne outbreak data linked to E. coli in various food products.
Main Results:
- Identification of prevalent E. coli pathotypes responsible for foodborne illnesses.
- Documentation of foodborne outbreak cases associated with E. coli contamination in natural foods and food products.
- Summary of the infection characteristics and symptoms for major E. coli pathotypes.
Conclusions:
- Understanding E. coli pathotypes and outbreak patterns is crucial for effective food safety interventions.
- Ongoing research and technological advancements are vital for developing robust strategies to prevent and control bacterial food contamination.
- Implementing comprehensive measures across the farm-to-table continuum is essential to mitigate the risks associated with foodborne E. coli.
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