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Updated: Feb 28, 2026

A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
Published on: April 1, 2019
Polymorphisms in CYP2C9 are associated with response to indomethacin among neonates with patent ductus arteriosus
Caitlin J Smith1, Kelli K Ryckman1, Timothy M Bahr2
1Department of Epidemiology, University of Iowa, Iowa City, Iowa.
Insights
Genetic variations in CYP2C9 influence how preterm infants respond to indomethacin treatment for patent ductus arteriosus (PDA). Specific single-nucleotide polymorphisms (SNPs) are linked to successful PDA closure, suggesting personalized medicine approaches.
Area of Science:
- Pharmacogenomics
- Neonatal Medicine
- Genetics
Background:
- Patent ductus arteriosus (PDA) is a frequent complication in preterm infants.
- Indomethacin is a standard treatment for PDA, with response variability.
- Evidence indicates that indomethacin response is significantly heritable.
Purpose of the Study:
- To investigate the association between single-nucleotide polymorphisms (SNPs) in the CYP2C9 gene and PDA closure in response to indomethacin.
- To identify genetic markers that predict indomethacin efficacy in neonates.
Main Methods:
- Analysis of six SNPs in CYP2C9 for association with indomethacin response.
- Case-control study comparing responders and non-responders (requiring surgery).
- Independent transmission disequilibrium tests in parent-child trios.
Main Results:
- The G allele of rs2153628 was associated with increased odds of indomethacin response (OR: 1.918).
- rs2153628 (G allele) and rs1799853 (T allele) were overtransmitted in responders, supporting the case-control findings.
- These SNPs are linked to altered indomethacin metabolism.
Conclusions:
- Two CYP2C9 SNPs, rs2153628 and rs1799853, are associated with indomethacin response in treating PDA.
- Genetic polymorphisms in CYP2C9 may influence the effectiveness of indomethacin for PDA closure.
- These findings support the potential for genotype-guided indomethacin therapy.
Abstract:
BackgroundPatent ductus arteriosus (PDA) is a common complication seen in preterm infants. Indomethacin is routinely used to treat PDA. Evidence suggests that the response of indomethacin is highly heritable. This study investigated the association between single-nucleotide polymorphisms (SNPs) in CYP2C9 and the closure of PDA in response to indomethacin.MethodsSix SNPs in CYP2C9 were analyzed for association with indomethacin response. A case-control analysis was performed among neonates who responded to indomethacin (responders) and among those who required surgical ligation (non-responders). Independent transmission disequilibrium tests were performed among parent-child trios of responders and non-responders.ResultsThe G allele of rs2153628 was associated with increased odds of response to indomethacin in the case-control analysis (odds ratios (OR): 1.918, 95% confidence interval (CI): 1.056, 3.483). Among indomethacin responders, the G allele of rs2153628 and the T allele of rs1799853 were overtransmitted from the parents to their child (OR: 2.667, 95% CI: 1.374, 5.177 and OR: 2.375, 95% CI: 1.040, 5.425, respectively), consistent with the case-control analysis.ConclusionWe identified an association between two SNPs in CYP2C9, rs2153628 and rs1799853, and indomethacin response for the treatment of PDA. These findings suggest that response to indomethacin in the closure of PDA may be influenced by polymorphisms associated with altered indomethacin metabolism.
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