Characterization of a blaNDM‑1‑harboring plasmid from a Salmonella enterica clinical isolate in China

Jinwei Huang1, Shanshan Deng2, Jianmin Ren1

  • 1Department of Infection, The Fifth Affiliated Hospital of Wenzhou Medical University, Lishui, Zhejiang 323000, P.R. China.

Insights

A novel plasmid, pHS36-NDM, carrying the New Delhi metallo-β-lactamase-1 (NDM-1) carbapenem resistance gene was identified in Salmonella Stanley. This finding highlights the complex mechanisms of antibiotic resistance gene spread and poses a significant threat to public health.

Area of Science:

  • Microbiology
  • Genetics
  • Molecular Biology

Background:

  • Plasmid-mediated antibiotic resistance gene transmission is a major global health concern.
  • The emergence of carbapenem resistance, particularly NDM-1, necessitates understanding resistance mechanisms and plasmid dynamics.

Purpose of the Study:

  • To sequence and characterize the novel plasmid pHS36-NDM identified in a Salmonella Stanley isolate.
  • To elucidate the genetic elements contributing to antibiotic resistance and plasmid stability within pHS36-NDM.

Main Methods:

  • Whole-genome sequencing using a 454 GS-FLX pyrosequencing system.
  • Bioinformatic analysis to identify open reading frames, resistance genes, and mobile genetic elements.
  • Comparative analysis with known NDM-1 plasmids.

Main Results:

  • The ~140 kb plasmid pHS36-NDM harbors the blaNDM-1 gene and multiple other resistance genes, including blaCMY-6, sugE, dfrA12, aadA2, rmtC, qacE∆1, sul1, and bleMBL.
  • The plasmid contains genes for horizontal transfer and stable inheritance, such as a type 4 secretion system and stbA.
  • pHS36-NDM shows homology to international NDM-1 plasmids but differs in incompatibility group and surrounding genetic structure from Chinese isolates.

Conclusions:

  • The characterization of pHS36-NDM provides insights into the genetic basis of multidrug resistance and plasmid dissemination.
  • Understanding the specific resistance and dispersal mechanisms of this plasmid is crucial for combating the spread of NDM-1 carbapenemase.

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