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Updated: Feb 27, 2026

Author Spotlight: Quantitative Detection of DNA Protein Crosslinks and Their Post-Translational Modifications
Published on: April 21, 2023
Regulation of DNA damage tolerance in mammalian cells by post-translational modifications of PCNA
Rie Kanao1, Chikahide Masutani1
1Department of Genome Dynamics, Research Institute of Environmental Medicine, Nagoya University, Nagoya, Japan.
Abstract:
DNA damage tolerance pathways, which include translesion DNA synthesis (TLS) and template switching, are crucial for prevention of DNA replication arrest and maintenance of genomic stability. However, these pathways utilize error-prone DNA polymerases or template exchange between sister DNA strands, and consequently have the potential to induce mutations or chromosomal rearrangements. Post-translational modifications of proliferating cell nuclear antigen (PCNA) play important roles in controlling these pathways. For example, TLS is mediated by mono-ubiquitination of PCNA at lysine 164, for which RAD6-RAD18 is the primary E2-E3 complex. Elaborate protein-protein interactions between mono-ubiquitinated PCNA and Y-family DNA polymerases constitute the core of the TLS regulatory system, and enhancers of PCNA mono-ubiquitination and de-ubiquitinating enzymes finely regulate TLS and suppress TLS-mediated mutagenesis. The template switching pathway is promoted by K63-linked poly-ubiquitination of PCNA at lysine 164. Poly-ubiquitination is achieved by a coupled reaction mediated by two sets of E2-E3 complexes, RAD6-RAD18 and MMS2-UBC13-HTLF/SHPRH. In addition to these mono- and poly-ubiquitinations, simultaneous mono-ubiquitinations on multiple units of the PCNA homotrimeric ring promote an unidentified damage tolerance mechanism that remains to be fully characterized. Furthermore, SUMOylation of PCNA in mammalian cells can negatively regulate recombination. Other modifications, including ISGylation, acetylation, methylation, or phosphorylation, may also play roles in DNA damage tolerance and control of genomic stability.
Insights
Post-translational modifications of proliferating cell nuclear antigen (PCNA) regulate DNA damage tolerance pathways like translesion DNA synthesis (TLS) and template switching. These modifications are crucial for genomic stability but can also cause mutations.
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- DNA damage tolerance pathways prevent replication arrest and maintain genomic stability.
- These pathways, including translesion DNA synthesis (TLS) and template switching, can introduce mutations or rearrangements.
- Post-translational modifications of proliferating cell nuclear antigen (PCNA) are key regulators of these pathways.
Purpose of the Study:
- To elucidate the roles of PCNA post-translational modifications in DNA damage tolerance.
- To understand how these modifications control mutagenic and non-mutagenic repair pathways.
- To highlight the intricate regulatory mechanisms governing genomic stability.
Main Methods:
- Focuses on the molecular mechanisms of PCNA ubiquitination (mono- and poly-ubiquitination) and its impact on DNA polymerases.
- Examines the roles of specific E2-E3 complexes (e.g., RAD6-RAD18, MMS2-UBC13) in PCNA modification.
- Considers other modifications like SUMOylation, ISGylation, acetylation, methylation, and phosphorylation.
Main Results:
- PCNA mono-ubiquitination at Lys164 by RAD6-RAD18 facilitates TLS.
- PCNA K63-linked poly-ubiquitination by RAD6-RAD18 and MMS2-UBC13-HTLF/SHPRH promotes template switching.
- Simultaneous mono-ubiquitinations on the PCNA ring suggest an uncharacterized damage tolerance mechanism.
- SUMOylation of PCNA negatively regulates recombination in mammalian cells.
Conclusions:
- PCNA post-translational modifications are critical for balancing DNA damage tolerance and preventing mutagenesis.
- Fine-tuning of TLS and template switching via PCNA modifications is essential for genomic integrity.
- Further research is needed to fully characterize novel PCNA-mediated damage tolerance pathways.
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