Related Experiment Video
Updated: Feb 27, 2026

A Contrast of Three Inoculation Techniques used to Determine the Race of Unknown Fusarium oxysporum f.sp. niveum Isolates
Published on: October 28, 2021
Yellow Rust Epidemics Worldwide Were Caused by Pathogen Races from Divergent Genetic Lineages
Sajid Ali1, Julian Rodriguez-Algaba1, Tine Thach1
1Department of Agroecology, Global Rust Reference Centre, Aarhus UniversitySlagelse, Denmark.
Abstract:
We investigated whether the recent worldwide epidemics of wheat yellow rust were driven by races of few clonal lineage(s) or populations of divergent races. Race phenotyping of 887 genetically diverse Puccinia striiformis isolates sampled in 35 countries during 2009-2015 revealed that these epidemics were often driven by races from few but highly divergent genetic lineages. PstS1 was predominant in North America; PstS2 in West Asia and North Africa; and both PstS1 and PstS2 in East Africa. PstS4 was prevalent in Northern Europe on triticale; PstS5 and PstS9 were prevalent in Central Asia; whereas PstS6 was prevalent in epidemics in East Africa. PstS7, PstS8 and PstS10 represented three genetic lineages prevalent in Europe. Races from other lineages were in low frequencies. Virulence to Yr9 and Yr27 was common in epidemics in Africa and Asia, while virulence to Yr17 and Yr32 were prevalent in Europe, corresponding to widely deployed resistance genes. The highest diversity was observed in South Asian populations, where frequent recombination has been reported, and no particular race was predominant in this area. The results are discussed in light of the role of invasions in shaping pathogen population across geographical regions. The results emphasized the lack of predictability of emergence of new races with high epidemic potential, which stresses the need for additional investments in population biology and surveillance activities of pathogens on global food crops, and assessments of disease vulnerability of host varieties prior to their deployment at larger scales.
Insights
Recent wheat yellow rust epidemics are driven by a few divergent pathogen lineages, not just clonal ones. This highlights the unpredictable nature of emerging races and the need for enhanced global surveillance.
Area of Science:
- Plant Pathology
- Population Genetics
- Agricultural Science
Background:
- Wheat yellow rust, caused by *Puccinia striiformis*, poses a significant threat to global food security.
- Recent epidemics suggest a complex population structure of the pathogen, but whether driven by few lineages or diverse races remains unclear.
Purpose of the Study:
- To investigate the genetic diversity and population structure of *Puccinia striiformis* isolates responsible for recent global wheat yellow rust epidemics.
- To determine if epidemics are driven by a few clonal lineages or a diverse population of races.
Main Methods:
- Race phenotyping of 887 *Puccinia striiformis* isolates from 35 countries (2009-2015).
- Analysis of geographical distribution and prevalence of different races and genetic lineages.
- Correlation of race prevalence with virulence to specific wheat resistance genes (*Yr* genes).
Main Results:
- Epidemics were driven by races from a few, highly divergent genetic lineages, not solely clonal ones.
- Specific lineages (e.g., *PstS1*, *PstS2*, *PstS4*-*PstS10*) showed distinct geographical prevalence and virulence patterns.
- South Asian populations exhibited the highest diversity with frequent recombination, lacking a predominant race.
Conclusions:
- Emergence of new, highly epidemic-potential races is unpredictable, necessitating increased investment in pathogen population biology and global surveillance.
- Understanding pathogen diversity and disease vulnerability is crucial for deploying resistant wheat varieties effectively.
- Invasions play a role in shaping pathogen populations across geographical regions.
More Related Videos
06:58Author Spotlight: Evaluation of Entomopathogenic Fungi in Wild Monochamus alternatus Populations for Biocontrol Applications in Forest Wood Borers
Published on: September 29, 2023
06:56Purification of High Molecular Weight Genomic DNA from Powdery Mildew for Long-Read Sequencing
Published on: March 31, 2017
Related Concept Videos
Gene Flow
Diversity of Protists I
Mutation, Gene Flow, and Genetic Drift
Genetic Drift
Viral Mutations
Viral Recombination