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Updated: Feb 27, 2026

Studying Cell Cycle-regulated Gene Expression by Two Complementary Cell Synchronization Protocols
Published on: June 6, 2017
Nuclear receptors connect progenitor transcription factors to cell cycle control
Marta Neto1,2,3, Marina Naval-Sánchez4, Delphine Potier4
1CABD, Andalusian Centre for Developmental Biology, CSIC-UPO-JA, 41013, Seville, Spain.
Abstract:
The specification and growth of organs is controlled simultaneously by networks of transcription factors. While the connection between these transcription factors with fate determinants is increasingly clear, how they establish the link with the cell cycle is far less understood. Here we investigate this link in the developing Drosophila eye, where two transcription factors, the MEIS1 homologue hth and the Zn-finger tsh, synergize to stimulate the proliferation of naïve eye progenitors. Experiments combining transcriptomics, open-chromatin profiling, motif analysis and functional assays indicate that these progenitor transcription factors exert a global regulation of the proliferation program. Rather than directly regulating cell cycle genes, they control proliferation through an intermediary layer of nuclear receptors of the ecdysone/estrogen-signaling pathway. This regulatory subnetwork between hth, tsh and nuclear receptors might be conserved from Drosophila to mammals, as we find a significant co-overexpression of their human homologues in specific cancer types.
Insights
Two transcription factors, hth and tsh, control cell proliferation in developing Drosophila eyes. They regulate the cell cycle indirectly through nuclear receptors, a mechanism potentially conserved in human cancers.
Area of Science:
- Developmental biology
- Molecular genetics
- Cell cycle regulation
Background:
- Organ development relies on transcription factors regulating cell fate and proliferation.
- The precise mechanisms linking transcription factors to the cell cycle remain unclear.
- The developing Drosophila eye serves as a model to study these regulatory networks.
Purpose of the Study:
- To investigate how transcription factors link to cell cycle control in developing organs.
- To elucidate the role of hth and tsh in regulating eye progenitor proliferation.
- To identify the downstream targets and pathways mediating this regulation.
Main Methods:
- Transcriptomics and open-chromatin profiling to identify regulatory elements and target genes.
- Motif analysis to predict transcription factor binding sites.
- Functional assays in Drosophila to validate the roles of hth, tsh, and downstream targets.
- Comparative analysis of homologous gene expression in human cancers.
Main Results:
- The transcription factors hth and tsh synergistically promote the proliferation of naive eye progenitors.
- These factors globally regulate the proliferation program, not by directly targeting cell cycle genes.
- Proliferation is controlled via an intermediary layer involving nuclear receptors of the ecdysone/estrogen-signaling pathway.
- A conserved regulatory subnetwork involving hth, tsh, and nuclear receptors is suggested by co-overexpression in human cancers.
Conclusions:
- Transcription factors hth and tsh coordinate organ growth by linking developmental programs to cell cycle progression.
- The identified regulatory pathway involving nuclear receptors provides a novel mechanism for cell cycle control.
- The conserved nature of this network highlights its potential importance in both development and disease, particularly in cancer.
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