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Published on: October 23, 2011
Optimization of genotypic and biochemical methods to profile P. acnes isolates from a patient population
Rubén Cebrián1, Sergio Arévalo1, Salvador Arias-Santiago2
1Microbiology Department, Faculty of Sciences, C/Fuentenueva s/n. University of Granada, 18071 Granada, Spain.
Abstract:
Propionibacterium acnes is a key factor in the pathogenesis of acne vulgaris, although currently it is also being associated with medical-device infections. The aim of this work was to validate a safe and quick identification and typing of 24 clinical isolates of Propionibacterium acnes, applying a range of biochemical as well as genetic methods, and investigating the pathogenic potential to associate the different types with human health. RAPD-PCRs revealed the existence of two discernible clusters in correspondence with the phylogroups I and II, according to the PAtig gene polymorphism, leading them to be assigned as P. acnes subsp. acnes subsp. nov. Biotyping according to the pattern of sugar fermentation evidenced that all the isolates from acne and the majority from opportunistic infections fit the biotype I-B3. Consistent with the multiplex touchdown analysis, nearly all the isolates included in this biotype belonged to the subgroups IA1 (the exception being four strains classified as IB). The remaining ones were assigned to phylogroup II, considered to be part of the normal cutaneous microbiota. The susceptibility to three antibiotics was also investigated to explore the relations with the virulence, although no clear trend was identified.
Insights
This study identifies two main types of Propionibacterium acnes (P. acnes) using genetic and biochemical methods. One type is linked to acne and infections, while the other is normal skin bacteria.
Area of Science:
- Microbiology
- Dermatology
- Infectious Diseases
Background:
- Propionibacterium acnes (P. acnes) is implicated in acne vulgaris pathogenesis and medical device infections.
- Accurate identification and typing of P. acnes strains are crucial for understanding their role in human health.
Purpose of the Study:
- To validate a rapid and safe method for identifying and typing 24 clinical P. acnes isolates.
- To investigate the pathogenic potential of different P. acnes types and their association with human health.
Main Methods:
- Random Amplified Polymorphic DNA-PCR (RAPD-PCR) for genetic clustering.
- Biotyping based on sugar fermentation patterns.
- Multiplex touchdown PCR for phylogroup and subgroup analysis.
Main Results:
- RAPD-PCR identified two clusters corresponding to phylogroups I and II (P. acnes subsp. acnes subsp. nov.).
- Biotyping revealed that most acne and opportunistic infection isolates belonged to biotype I-B3, subgroup IA1.
- Phylogroup II isolates were associated with normal cutaneous microbiota.
Conclusions:
- Distinct P. acnes types can be identified using a combination of genetic and biochemical methods.
- P. acnes strains associated with acne and infections differ from those found as normal skin flora.
- Further research is needed to clarify the relationship between antibiotic susceptibility and P. acnes virulence.
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